RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 PIH1D3Q9NQM4 214 aaKnown RBP12.93□□□□□ -0.34
SYNC-204ENST00000426909 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
SYNC-204ENST00000426909 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
SYNC-204ENST00000426909 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 GOLGA6L3A6NEY3 463 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
SYNC-204ENST00000426909 PDE6AP16499 860 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 GNAT2P19087 354 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 GJB2P29033 226 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 FGD1P98174 961 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
SYNC-204ENST00000426909 PICALMQ13492 652 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 Q6ZUG5 572 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
SYNC-204ENST00000426909 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 ZNF213O14771 459 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
SYNC-204ENST00000426909 ZBTB48P10074 688 aaPredicted RBP12.91□□□□□ -0.34
SYNC-204ENST00000426909 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
SYNC-204ENST00000426909 EVCP57679 992 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 RHBDL3P58872 404 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
SYNC-204ENST00000426909 TEX11Q8IYF3 940 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
SYNC-204ENST00000426909 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.34
SYNC-204ENST00000426909 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 CSADQ9Y600 493 aa12.91□□□□□ -0.34
SYNC-204ENST00000426909 FOXN1O15353 648 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 PFKFB2O60825 505 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
SYNC-204ENST00000426909 F13A1P00488 732 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 FGAP02671 866 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 NCLP19338 710 aaKnown RBP12.9□□□□□ -0.34
SYNC-204ENST00000426909 CYP7A1P22680 504 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 MCM5P33992 734 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 PPP4CP60510 307 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 ST3GAL1Q11201 340 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 SREBF2Q12772 1141 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 NECAB1Q8N987 351 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
SYNC-204ENST00000426909 NCOA7Q8NI08 942 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 SH3RF3Q8TEJ3 882 aaPredicted RBP12.9□□□□□ -0.34
SYNC-204ENST00000426909 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
SYNC-204ENST00000426909 CLMNQ96JQ2 1002 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 WRNIP1Q96S55 665 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
SYNC-204ENST00000426909 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
SYNC-204ENST00000426909 FOXP2O15409 715 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 TRDNQ13061 729 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 VGLL4Q14135 290 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 ADGRA1Q86SQ6 560 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 BRF1Q92994 677 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 STRBPQ96SI9 672 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 ELP3Q9H9T3 547 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 SAGE1Q9NXZ1 904 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 MTMR6Q9Y217 621 aa12.89□□□□□ -0.35
SYNC-204ENST00000426909 COL2A1P02458 1487 aaPredicted RBP12.89□□□□□ -0.35
SYNC-204ENST00000426909 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 MRE11P49959 708 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 INHBEP58166 350 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 NACAP1Q9BZK3 213 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
SYNC-204ENST00000426909 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
SYNC-204ENST00000426909 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
SYNC-204ENST00000426909 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
SYNC-204ENST00000426909 TM4SF4P48230 202 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 ZNF445P59923 1031 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
SYNC-204ENST00000426909 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
SYNC-204ENST00000426909 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms