RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
HDLBP-212ENST00000426343 MTMR2Q13614 643 aa21.51■■□□□ 1.03
HDLBP-212ENST00000426343 FAM110CQ1W6H9 321 aa21.51■■□□□ 1.03
HDLBP-212ENST00000426343 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
HDLBP-212ENST00000426343 EDC3Q96F86 508 aaKnown RBP21.51■■□□□ 1.03
HDLBP-212ENST00000426343 ASCC2Q9H1I8 757 aaPredicted RBP21.51■■□□□ 1.03
HDLBP-212ENST00000426343 DCTPP1Q9H773 170 aa21.51■■□□□ 1.03
HDLBP-212ENST00000426343 TMOD4Q9NZQ9 345 aa21.51■■□□□ 1.03
HDLBP-212ENST00000426343 GRK4P32298 578 aa21.5■■□□□ 1.03
HDLBP-212ENST00000426343 PRKCZQ05513 592 aa21.5■■□□□ 1.03
HDLBP-212ENST00000426343 SHROOM1Q2M3G4 852 aaPredicted RBP21.5■■□□□ 1.03
HDLBP-212ENST00000426343 ANKRD13CQ8N6S4 541 aa21.5■■□□□ 1.03
HDLBP-212ENST00000426343 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.5■■□□□ 1.034e-7■□□□□ 9.9
HDLBP-212ENST00000426343 CENPFP49454 3210 aa21.5■■□□□ 1.03
HDLBP-212ENST00000426343 GH2P01242 217 aa21.49■■□□□ 1.03
HDLBP-212ENST00000426343 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
HDLBP-212ENST00000426343 PLCD1P51178 756 aa21.49■■□□□ 1.03
HDLBP-212ENST00000426343 CERKLQ49MI3 558 aaPredicted RBP21.49■■□□□ 1.03
HDLBP-212ENST00000426343 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
HDLBP-212ENST00000426343 TNPO2O14787 897 aaKnown RBP21.48■■□□□ 1.03
HDLBP-212ENST00000426343 SMARCA5O60264 1052 aaPredicted RBP21.48■■□□□ 1.03
HDLBP-212ENST00000426343 ADD2P35612 726 aa21.48■■□□□ 1.03
HDLBP-212ENST00000426343 PRPF38BQ5VTL8 546 aaKnown RBP21.48■■□□□ 1.03
HDLBP-212ENST00000426343 GABRQQ9UN88 632 aa21.48■■□□□ 1.03
HDLBP-212ENST00000426343 MYO5AQ9Y4I1 1855 aaKnown RBP21.47■■□□□ 1.03
HDLBP-212ENST00000426343 MYCP01106 439 aaPredicted RBP21.47■■□□□ 1.03
HDLBP-212ENST00000426343 SHMT1P34896 483 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 FLT3LGP49771 235 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 GABPAQ06546 454 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 UBE3CQ15386 1083 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 USP17L2Q6R6M4 530 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 LCORLQ8N3X6 602 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 SLAIN1Q8ND83 568 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 COA7Q96BR5 231 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
HDLBP-212ENST00000426343 ECHDC1Q9NTX5 307 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 MCM9Q9NXL9 1143 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 SIPA1L1O43166 1804 aa21.47■■□□□ 1.03
HDLBP-212ENST00000426343 UBXN2AP68543 259 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 IRX3P78415 501 aaPredicted RBP21.46■■□□□ 1.03
HDLBP-212ENST00000426343 IRF5Q13568 498 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 ABCB5Q2M3G0 1257 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 P2RX7Q99572 595 aaKnown RBP21.46■■□□□ 1.03
HDLBP-212ENST00000426343 CABP5Q9NP86 173 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 EMILIN3Q9NT22 766 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 MORF4L1Q9UBU8 362 aa21.46■■□□□ 1.03
HDLBP-212ENST00000426343 MTFR1Q15390 333 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 ZSCAN25Q6NSZ9 544 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 PXYLP1Q8TE99 480 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 SDR42E1Q8WUS8 393 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 C12orf42Q96LP6 360 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 ARMT1Q9H993 441 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 ATP8A2Q9NTI2 1148 aa21.45■■□□□ 1.02
HDLBP-212ENST00000426343 ZSWIM8A7E2V4 1837 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 FOCADQ5VW36 1801 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 ADCY3O60266 1144 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 MBD4O95243 580 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 USP14P54578 494 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 RAB3GAP1Q15042 981 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 BIN2Q9UBW5 565 aaPredicted RBP21.44■■□□□ 1.02
HDLBP-212ENST00000426343 PTPRFP10586 1907 aa21.44■■□□□ 1.02
HDLBP-212ENST00000426343 HERVK_113P62684 666 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 NKX2-3Q8TAU0 364 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 GTF3C2Q8WUA4 911 aaPredicted RBP21.43■■□□□ 1.02
HDLBP-212ENST00000426343 GPATCH3Q96I76 525 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 KIAA1683Q9H0B3 1180 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
HDLBP-212ENST00000426343 KIAA0100Q14667 2235 aaKnown RBP21.43■■□□□ 1.02
HDLBP-212ENST00000426343 CCL5P13501 91 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
HDLBP-212ENST00000426343 PDE4DIPQ5VU43 2346 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 GPRC5AQ8NFJ5 357 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 CDK5RAP2Q96SN8 1893 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 FEZ1Q99689 392 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 SWAP70Q9UH65 585 aa21.42■■□□□ 1.02
HDLBP-212ENST00000426343 LOC285556D6RIA3 1793 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 PRKAB2O43741 272 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 GJB1P08034 283 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 GUCY1A2P33402 732 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 RNF208Q9H0X6 261 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 GJD2Q9UKL4 321 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 BRCA2P51587 3418 aa21.41■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L15C9J2P7 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L13C9JLJ4 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L11C9JVI0 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L18D6R9N7 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L22D6RA61 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L17D6RBQ6 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L19D6RCP7 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L20D6RJB6 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 CHGBP05060 677 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 CYP2D6P10635 497 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 USP17L24Q0WX57 530 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 ACER1Q8TDN7 264 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 RBPJLQ9UBG7 517 aa21.4■■□□□ 1.02
HDLBP-212ENST00000426343 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.02
HDLBP-212ENST00000426343 RBBP6Q7Z6E9 1792 aaKnown RBP21.39■■□□□ 1.01
HDLBP-212ENST00000426343 ELNP15502 786 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms