RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PRRT2Q7Z6L0 340 aaPredicted RBP16.43■□□□□ 0.22
SNX3-204ENST00000426155 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
SNX3-204ENST00000426155 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
SNX3-204ENST00000426155 OSBP2Q969R2 916 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 SERPINB13Q9UIV8 391 aa16.43■□□□□ 0.22
SNX3-204ENST00000426155 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 M0R2C6 588 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 PDHXO00330 501 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 POLR3DP05423 398 aaPredicted RBP16.42■□□□□ 0.22
SNX3-204ENST00000426155 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
SNX3-204ENST00000426155 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 FSD1Q9BTV5 496 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 EHD4Q9H223 541 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 ZBTB21Q9ULJ3 1066 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 MGAMO43451 1857 aa16.42■□□□□ 0.22
SNX3-204ENST00000426155 HTTP42858 3142 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 RNF113AO15541 343 aaKnown RBP16.41■□□□□ 0.22
SNX3-204ENST00000426155 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
SNX3-204ENST00000426155 SHMT1P34896 483 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 PDE1AP54750 535 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 SPP2Q13103 211 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 APPBP2Q92624 585 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
SNX3-204ENST00000426155 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
SNX3-204ENST00000426155 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 GH2P01242 217 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 CYP2C8P10632 490 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 HMGCS2P54868 508 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 GABPAQ06546 454 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 TREML2Q5T2D2 321 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 STRBPQ96SI9 672 aaKnown RBP16.4■□□□□ 0.22
SNX3-204ENST00000426155 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
SNX3-204ENST00000426155 TLR2O60603 784 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 ASNSP08243 561 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 SP3Q02447 781 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 NUCB1Q02818 461 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 MTMR2Q13614 643 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 ARHGAP39Q9C0H5 1083 aa16.39■□□□□ 0.21
SNX3-204ENST00000426155 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
SNX3-204ENST00000426155 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
SNX3-204ENST00000426155 USP17L21D6R901 530 aa16.38■□□□□ 0.21
SNX3-204ENST00000426155 GPAA1O43292 621 aa16.38■□□□□ 0.21
SNX3-204ENST00000426155 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
SNX3-204ENST00000426155 FASTKD5Q7L8L6 764 aaKnown RBP16.38■□□□□ 0.21
SNX3-204ENST00000426155 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
SNX3-204ENST00000426155 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
SNX3-204ENST00000426155 TRIM17Q9Y577 477 aa16.38■□□□□ 0.21
SNX3-204ENST00000426155 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
SNX3-204ENST00000426155 GSG1L2A8MUP6 293 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SNX3-204ENST00000426155 RAB3GAP1Q15042 981 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 OTOP1Q7RTM1 612 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 PLEKHM2Q8IWE5 1019 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 AS3MTQ9HBK9 375 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
SNX3-204ENST00000426155 CENPFP49454 3210 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
SNX3-204ENST00000426155 ZMYM1Q5SVZ6 1142 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
SNX3-204ENST00000426155 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
SNX3-204ENST00000426155 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
SNX3-204ENST00000426155 AKR1B1P15121 316 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 CTGFP29279 349 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 SEPT2Q15019 361 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
SNX3-204ENST00000426155 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 HPS5Q9UPZ3 1129 aa16.35■□□□□ 0.21
SNX3-204ENST00000426155 PDE4AP27815 886 aa16.34■□□□□ 0.21
SNX3-204ENST00000426155 BACE1P56817 501 aa16.34■□□□□ 0.21
SNX3-204ENST00000426155 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
SNX3-204ENST00000426155 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
SNX3-204ENST00000426155 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
SNX3-204ENST00000426155 ARPP21Q9UBL0 812 aaPredicted RBP16.34■□□□□ 0.21
SNX3-204ENST00000426155 A0A0D9SFI3 127 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 FOXP2O15409 715 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 APPP05067 770 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms