RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 TNKSO95271 1327 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 BRD1O95696 1058 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 SYT1P21579 422 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 SMARCA1P28370 1054 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 NOVP48745 357 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 STK3Q13188 491 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 GPC2Q8N158 579 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 FANCBQ8NB91 859 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 HOOK2Q96ED9 719 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 ZSCAN16Q9H4T2 348 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 SAP30BPQ9UHR5 308 aaKnown RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-211ENST00000425989 TACC3Q9Y6A5 838 aa11.22□□□□□ -0.61
HDLBP-211ENST00000425989 SBF1O95248 1867 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 LARGE1O95461 756 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 CYP2D6P10635 497 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 IFNAR1P17181 557 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 RASA1P20936 1047 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 YY1P25490 414 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 KIF5BP33176 963 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 PICALMQ13492 652 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-211ENST00000425989 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 FAM177A1Q8N128 213 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-211ENST00000425989 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-211ENST00000425989 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
HDLBP-211ENST00000425989 ANP32EQ9BTT0 268 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 MYOZ2Q9NPC6 264 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 CNOT7Q9UIV1 285 aaKnown RBP11.21□□□□□ -0.61
HDLBP-211ENST00000425989 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
HDLBP-211ENST00000425989 MYH8P13535 1937 aa11.21□□□□□ -0.62
HDLBP-211ENST00000425989 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 PRDM1O75626 825 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 CCT2P78371 535 aaKnown RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 SSRP1Q08945 709 aaKnown RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 COL9A3Q14050 684 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 RTN1Q16799 776 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 ATL3Q6DD88 541 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 CRACR2BQ8N4Y2 399 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 TNPO1Q92973 898 aaKnown RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 DDX4Q9NQI0 724 aaKnown RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
HDLBP-211ENST00000425989 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-211ENST00000425989 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 STK36Q9NRP7 1315 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 H3BQV1 296 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 WNT10BO00744 389 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
HDLBP-211ENST00000425989 XBP1P17861 261 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
HDLBP-211ENST00000425989 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 TROAPQ12815 778 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 SKOR2Q2VWA4 1001 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-211ENST00000425989 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 STK11IPQ8N1F8 1099 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 MKL1Q969V6 931 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 ZKSCAN3Q9BRR0 538 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 CABP5Q9NP86 173 aa11.19□□□□□ -0.62
HDLBP-211ENST00000425989 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 FMNL1O95466 1100 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 CTDNEP1O95476 244 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 TTLL1O95922 423 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 MCM4P33991 863 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 NFIAQ12857 509 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 NTRK3Q16288 839 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 RNF26Q9BY78 433 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 IL17RBQ9NRM6 502 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 MTMR4Q9NYA4 1195 aa11.18□□□□□ -0.62
HDLBP-211ENST00000425989 ORC3Q9UBD5 711 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
HDLBP-211ENST00000425989 COL4A5P29400 1685 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms