RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
LINC00839-201ENST00000424751 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 FAM217BQ9NTX9 383 aaPredicted RBP16.62■□□□□ 0.25
LINC00839-201ENST00000424751 FLT1P17948 1338 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 FOCADQ5VW36 1801 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 ZBTB22O15209 634 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 FIBPO43427 364 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 RASSF7Q02833 373 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
LINC00839-201ENST00000424751 KIAA1524Q8TCG1 905 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
LINC00839-201ENST00000424751 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
LINC00839-201ENST00000424751 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC00839-201ENST00000424751 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 C12orf60Q5U649 245 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 NFKBIEO00221 500 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 WDHD1O75717 1129 aaPredicted RBP16.61■□□□□ 0.25
LINC00839-201ENST00000424751 POLD1P28340 1107 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 C17orf53Q8N3J3 647 aaPredicted RBP16.61■□□□□ 0.25
LINC00839-201ENST00000424751 CCDC82Q8N4S0 544 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 PHKBQ93100 1093 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
LINC00839-201ENST00000424751 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 FAM196BA6NMK8 535 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
LINC00839-201ENST00000424751 CRKP46108 304 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 EVCP57679 992 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 GSTO1P78417 241 aa16.6■□□□□ 0.25
LINC00839-201ENST00000424751 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
LINC00839-201ENST00000424751 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 PSMD14O00487 310 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
LINC00839-201ENST00000424751 SEC23AQ15436 765 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 GIMAP6Q6P9H5 292 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 LARGE2Q8N3Y3 721 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 GTPBP4Q9BZE4 634 aaKnown RBP16.59■□□□□ 0.25
LINC00839-201ENST00000424751 PRDM10Q9NQV6 1147 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 TNKSO95271 1327 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 TCP10Q12799 353 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 PPP4R3BQ5MIZ7 849 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
LINC00839-201ENST00000424751 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 TSC1Q92574 1164 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
LINC00839-201ENST00000424751 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
LINC00839-201ENST00000424751 BAG3O95817 575 aa16.58■□□□□ 0.25
LINC00839-201ENST00000424751 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.25
LINC00839-201ENST00000424751 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.25
LINC00839-201ENST00000424751 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 LDHCP07864 332 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 PSME4Q14997 1843 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
LINC00839-201ENST00000424751 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 PDCL2Q8N4E4 241 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 KRT23Q9C075 422 aa16.58■□□□□ 0.24
LINC00839-201ENST00000424751 SIPA1L1O43166 1804 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
LINC00839-201ENST00000424751 FGRP09769 529 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
LINC00839-201ENST00000424751 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
LINC00839-201ENST00000424751 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
LINC00839-201ENST00000424751 EGFRP00533 1210 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 TGFB2P61812 414 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 DNM1Q05193 864 aaKnown RBP16.56■□□□□ 0.24
LINC00839-201ENST00000424751 WTAPQ15007 396 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
LINC00839-201ENST00000424751 KCNF1Q9H3M0 494 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
LINC00839-201ENST00000424751 CBX1P83916 185 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 TFAP4Q01664 338 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 NTRK3Q16288 839 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
LINC00839-201ENST00000424751 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00839-201ENST00000424751 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
LINC00839-201ENST00000424751 RASA1P20936 1047 aa16.55■□□□□ 0.24
LINC00839-201ENST00000424751 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC00839-201ENST00000424751 FAM200AQ8TCP9 573 aa16.55■□□□□ 0.24
LINC00839-201ENST00000424751 ESR2Q92731 530 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms