RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 MBD3O95983 291 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
ACTN4-203ENST00000424234 TTC6Q86TZ1 520 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 PANK2Q9BZ23 570 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
ACTN4-203ENST00000424234 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 TACC3Q9Y6A5 838 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 ZNF213O14771 459 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
ACTN4-203ENST00000424234 GABPAQ06546 454 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 SLC44A5Q8NCS7 719 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 DYNLL2Q96FJ2 89 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 PI4KBQ9UBF8 816 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 SERPINB13Q9UIV8 391 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 NEDD4P46934 1319 aa16.55■□□□□ 0.24
ACTN4-203ENST00000424234 FAM196BA6NMK8 535 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 NBPF12Q5TAG4 269 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-203ENST00000424234 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 METTL16Q86W50 562 aaKnown RBP16.54■□□□□ 0.24
ACTN4-203ENST00000424234 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-203ENST00000424234 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
ACTN4-203ENST00000424234 ADCK5Q3MIX3 580 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 AKNAD1Q5T1N1 836 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 FOXD4L5Q5VV16 416 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-203ENST00000424234 CAVIN1Q6NZI2 390 aaKnown RBP16.53■□□□□ 0.24
ACTN4-203ENST00000424234 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 STK11IPQ8N1F8 1099 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 FOXD4L4Q8WXT5 416 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-203ENST00000424234 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 ALDH8A1Q9H2A2 487 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-203ENST00000424234 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
ACTN4-203ENST00000424234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
ACTN4-203ENST00000424234 ZSCAN23Q3MJ62 389 aa16.52■□□□□ 0.24
ACTN4-203ENST00000424234 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
ACTN4-203ENST00000424234 GPT2Q8TD30 523 aa16.52■□□□□ 0.24
ACTN4-203ENST00000424234 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
ACTN4-203ENST00000424234 MYH6P13533 1939 aa16.52■□□□□ 0.24
ACTN4-203ENST00000424234 E7EWF7 191 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
ACTN4-203ENST00000424234 FGRP09769 529 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 SHMT1P34896 483 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 ANKRD1Q15327 319 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-203ENST00000424234 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 HERC5Q9UII4 1024 aaKnown RBP16.51■□□□□ 0.23
ACTN4-203ENST00000424234 TRAF5O00463 557 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 PRDM1O75626 825 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
ACTN4-203ENST00000424234 CPA1P15085 419 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 CDK8P49336 464 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 MAP3K10Q02779 954 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 KRT32Q14532 448 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-203ENST00000424234 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
ACTN4-203ENST00000424234 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 ORC4O43929 436 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 TBC1D12O60347 775 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-203ENST00000424234 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
ACTN4-203ENST00000424234 PDE4BQ07343 736 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-203ENST00000424234 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 MFSD6Q6ZSS7 791 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 FOXP4Q8IVH2 680 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-203ENST00000424234 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
ACTN4-203ENST00000424234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.5■□□□□ 0.231e-7■■■■□ 20.4
ACTN4-203ENST00000424234 STX6O43752 255 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 RASA1P20936 1047 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 FMR1Q06787 632 aaKnown RBP eCLIP16.49■□□□□ 0.236e-7■■■■□ 19.6
ACTN4-203ENST00000424234 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
ACTN4-203ENST00000424234 B4E1Z4 1266 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 LARGE1O95461 756 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
ACTN4-203ENST00000424234 DCAF15Q66K64 600 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
ACTN4-203ENST00000424234 CNNM2Q9H8M5 875 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
ACTN4-203ENST00000424234 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 SYT1P21579 422 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
ACTN4-203ENST00000424234 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
ACTN4-203ENST00000424234 NCOA7Q8NI08 942 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms