RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 AIDAQ96BJ3 306 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-204ENST00000424143 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 MED15Q96RN5 788 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
C9orf3-204ENST00000424143 RNF41Q9H4P4 317 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-204ENST00000424143 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
C9orf3-204ENST00000424143 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 LRRC10BA6NIK2 292 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 BTBD18B2RXH4 712 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 SASH3O75995 380 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 ITGA6P23229 1130 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 CUL4BQ13620 913 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 CNGA4Q8IV77 575 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 PDILTQ8N807 584 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 RNF26Q9BY78 433 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-204ENST00000424143 STRN4Q9NRL3 753 aa17.34■□□□□ 0.37
C9orf3-204ENST00000424143 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
C9orf3-204ENST00000424143 MYO5AQ9Y4I1 1855 aaKnown RBP17.33■□□□□ 0.37
C9orf3-204ENST00000424143 KIF5CO60282 957 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 APPP05067 770 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 SEMA3FQ13275 785 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 TRIM14Q14142 442 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.37
C9orf3-204ENST00000424143 FILIP1LQ4L180 1135 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 NLRP10Q86W26 655 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 GBP3Q9H0R5 595 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 NAPBQ9H115 298 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 SENP2Q9HC62 589 aa17.33■□□□□ 0.37
C9orf3-204ENST00000424143 FOXN1O15353 648 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 ERLIN1O75477 346 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 STARD3NLO95772 234 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
C9orf3-204ENST00000424143 HNRNPH2P55795 449 aaKnown RBP17.32■□□□□ 0.36
C9orf3-204ENST00000424143 LONRF2Q1L5Z9 754 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 MFSD6Q6ZSS7 791 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 TMTC1Q8IUR5 882 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 NKX2-3Q8TAU0 364 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 DHX58Q96C10 678 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 CNNM1Q9NRU3 951 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 DENND2AQ9ULE3 1009 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 PDE8AO60658 829 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
C9orf3-204ENST00000424143 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 IL2RBP14784 551 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 XBP1P17861 261 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
C9orf3-204ENST00000424143 CHMP4BP1P59074 171 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 SPAG1Q07617 926 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 WHAMMP3Q1A5X7 153 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 FAM89AQ96GI7 184 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 EPB41L4AQ9HCS5 686 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-204ENST00000424143 ANAPC4Q9UJX5 808 aa17.32■□□□□ 0.36
C9orf3-204ENST00000424143 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 RPS6KA5O75582 802 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 WTAPQ15007 396 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 HDXQ7Z353 690 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 MRPL44Q9H9J2 332 aaKnown RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 SAMSN1Q9NSI8 373 aaKnown RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 CWC15Q9P013 229 aaKnown RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 LIMA1Q9UHB6 759 aaKnown RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 WWC3Q9ULE0 1092 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
C9orf3-204ENST00000424143 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-204ENST00000424143 ERICH2A1L162 156 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 MFAP3LO75121 409 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 SEC31AO94979 1220 aaKnown RBP17.3■□□□□ 0.36
C9orf3-204ENST00000424143 PCP11498 1178 aaKnown RBP17.3■□□□□ 0.36
C9orf3-204ENST00000424143 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 GOLGA8FQ08AF8 430 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 GOLGA8DPQ0D2H9 430 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 IGSF22Q8N9C0 903 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 GREM2Q9H772 168 aa17.3■□□□□ 0.36
C9orf3-204ENST00000424143 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 RXRAP19793 462 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 GTF2E1P29083 439 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-204ENST00000424143 PHKA1P46020 1223 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 DPYDQ12882 1025 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 BEND6Q5SZJ8 279 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-204ENST00000424143 ZNF662Q6ZS27 426 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 CSRNP2Q9H175 543 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 DISP2A7MBM2 1401 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 CTAGE9A4FU28 777 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 PPP1R3GB7ZBB8 358 aa17.29■□□□□ 0.36
C9orf3-204ENST00000424143 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
C9orf3-204ENST00000424143 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms