RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZNF287Q9HBT7 754 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 AKR1B1P15121 316 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 TSGA10IPQ3SY00 556 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 CST9Q5W186 159 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
DDX55-203ENST00000421670 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.59■□□□□ 0.57
DDX55-203ENST00000421670 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
DDX55-203ENST00000421670 KDM4AO75164 1064 aa18.58■□□□□ 0.56
DDX55-203ENST00000421670 PCP11498 1178 aaKnown RBP18.58■□□□□ 0.56
DDX55-203ENST00000421670 JAG1P78504 1218 aa18.58■□□□□ 0.56
DDX55-203ENST00000421670 FSTL1Q12841 308 aa18.58■□□□□ 0.56
DDX55-203ENST00000421670 TRDNQ13061 729 aa18.58■□□□□ 0.56
DDX55-203ENST00000421670 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
DDX55-203ENST00000421670 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
DDX55-203ENST00000421670 ZKSCAN4Q969J2 545 aaPredicted RBP18.58■□□□□ 0.56
DDX55-203ENST00000421670 JAKMIP1Q96N16 626 aaKnown RBP18.58■□□□□ 0.56
DDX55-203ENST00000421670 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
DDX55-203ENST00000421670 TSPY2A6NKD2 308 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 RBM25P49756 843 aaKnown RBP18.57■□□□□ 0.56
DDX55-203ENST00000421670 KRT32Q14532 448 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
DDX55-203ENST00000421670 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 ESR2Q92731 530 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 KRT23Q9C075 422 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
DDX55-203ENST00000421670 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.57■□□□□ 0.56
DDX55-203ENST00000421670 ZNF112Q9UJU3 913 aa18.57■□□□□ 0.56
DDX55-203ENST00000421670 PTPRFP10586 1907 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 GH2P01242 217 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 CPA1P15085 419 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 CAP2P40123 477 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 IREB2P48200 963 aaKnown RBP18.56■□□□□ 0.56
DDX55-203ENST00000421670 ANAPC15P60006 121 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 TFAP4Q01664 338 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 ABCB5Q2M3G0 1257 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 CYB5R4Q7L1T6 521 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
DDX55-203ENST00000421670 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
DDX55-203ENST00000421670 UBE2Q2LH0YL09 131 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
DDX55-203ENST00000421670 VGLL4Q14135 290 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.55■□□□□ 0.56
DDX55-203ENST00000421670 CHST3Q7LGC8 479 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 ARMC9Q7Z3E5 817 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CLEC10AQ8IUN9 316 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 NEK1Q96PY6 1258 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 ZKSCAN3Q9BRR0 538 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 NMT2O60551 498 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CTNND1O60716 968 aaKnown RBP18.55■□□□□ 0.56
DDX55-203ENST00000421670 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
DDX55-203ENST00000421670 C2orf69Q8N8R5 385 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CLMNQ96JQ2 1002 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 CCDC17Q96LX7 622 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 KIF2CQ99661 725 aa18.55■□□□□ 0.56
DDX55-203ENST00000421670 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDX55-203ENST00000421670 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
DDX55-203ENST00000421670 ANTXR2P58335 489 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 FKBP1BP68106 108 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 MAP3K9P80192 1104 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 SEPT2Q15019 361 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 SCYL3Q8IZE3 742 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
DDX55-203ENST00000421670 GUCY1A2P33402 732 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 BLOC1S2Q6QNY1 142 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 TMEM179Q6ZVK1 233 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 NEDD1Q8NHV4 660 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 CABP5Q9NP86 173 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 CSADQ9Y600 493 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 SNCAIPQ9Y6H5 919 aa18.53■□□□□ 0.56
DDX55-203ENST00000421670 ASNSP08243 561 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 PSMA5P28066 241 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 MCM5P33992 734 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 NOL9Q5SY16 702 aaKnown RBP18.52■□□□□ 0.56
DDX55-203ENST00000421670 LDLRAD1Q5T700 205 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 IL17RAQ96F46 866 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 CEP95Q96GE4 821 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 LRRC2Q9BYS8 371 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 ELP3Q9H9T3 547 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 PICK1Q9NRD5 415 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
DDX55-203ENST00000421670 PCNTO95613 3336 aa18.52■□□□□ 0.55
DDX55-203ENST00000421670 PRC1O43663 620 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 ZSWIM6Q9HCJ5 1215 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 TNKSO95271 1327 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 IGKV6D-41A0A0C4DH26 115 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
DDX55-203ENST00000421670 RPS6KB1P23443 525 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 HUNKP57058 714 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 RUFY3Q7L099 469 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
DDX55-203ENST00000421670 IQCA1Q86XH1 822 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms