RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 hCG_1984214I3L0E3 225 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 IKBKBO14920 756 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 PKP1Q13835 747 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 ZNF713Q8N859 430 aaPredicted RBP16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 BBXQ8WY36 941 aaPredicted RBP16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 CUEDC2Q9H467 287 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 LEMD3Q9Y2U8 911 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 NFE2L3Q9Y4A8 694 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 CPS1P31327 1500 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 FAM13AO94988 1023 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 SIK1P57059 783 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 PHKBQ93100 1093 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 TLR7Q9NYK1 1049 aaKnown RBP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 NT5C3AQ9H0P0 336 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 GREM2Q9H772 168 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 KDM3AQ9Y4C1 1321 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 ALDH1B1P30837 517 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 LETM2Q2VYF4 491 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 NR1I2O75469 434 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 PDE4DQ08499 809 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 KRBA2Q6ZNG9 492 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
AP000550.1-201ENST00000420508 STX17P56962 302 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 CHRNDQ07001 517 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 RPGRIP1Q96KN7 1286 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 TNKSO95271 1327 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 GNA14O95837 355 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 MYL1P05976 194 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 CLUL1Q15846 466 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 ZNF589Q86UQ0 364 aaPredicted RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
AP000550.1-201ENST00000420508 A6NNZ2 444 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 NEFHP12036 1026 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 TBC1D8BQ0IIM8 1120 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 TUBB8Q3ZCM7 444 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 ZNF569Q5MCW4 686 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 SAMM50Q9Y512 469 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 WDHD1O75717 1129 aaPredicted RBP16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 HLTFQ14527 1009 aaKnown RBP eCLIP16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 STMN4Q9H169 189 aaPredicted RBP16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 TFAP4Q01664 338 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
AP000550.1-201ENST00000420508 GTPBP6O43824 516 aaPredicted RBP16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 SCG2P13521 617 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 IFNAR1P17181 557 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 CSGALNACT2Q8N6G5 542 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 TNNC1P63316 161 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 RESTQ13127 1097 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 STK36Q9NRP7 1315 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 TTC14Q96N46 770 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 LRWD1Q9UFC0 647 aa16.6■□□□□ 0.25
AP000550.1-201ENST00000420508 EPB41P11171 864 aaKnown RBP16.59■□□□□ 0.25
AP000550.1-201ENST00000420508 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
AP000550.1-201ENST00000420508 HDXQ7Z353 690 aa16.59■□□□□ 0.25
AP000550.1-201ENST00000420508 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms