RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
TMEM50B-201ENST00000420455 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
TMEM50B-201ENST00000420455 MYO3BQ8WXR4 1341 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 FMNL1O95466 1100 aaPredicted RBP15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 RASA1P20936 1047 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 FANCBQ8NB91 859 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 IDI2Q9BXS1 227 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 DDX4Q9NQI0 724 aaKnown RBP15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 TOMM22Q9NS69 142 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 FAM173BQ6P4H8 233 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 ELP1O95163 1332 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 MBD3O95983 291 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 CALM1P0DP23 149 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 CALM2P0DP24 149 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 CALM3P0DP25 149 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 FUT2Q10981 343 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 R3HDM1Q15032 1099 aaKnown RBP15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 FERMT3Q86UX7 667 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 MICU3Q86XE3 530 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 STK11IPQ8N1F8 1099 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 ZNF287Q9HBT7 754 aa15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 ORC3Q9UBD5 711 aaPredicted RBP15.62■□□□□ 0.09
TMEM50B-201ENST00000420455 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 CPLX1O14810 134 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 FBXO18Q8NFZ0 1043 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 NAP1L2Q9ULW6 460 aaPredicted RBP15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 LTBP3Q9NS15 1303 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 CDK8P49336 464 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 IFIT1BQ5T764 474 aaKnown RBP15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 FBXW7Q969H0 707 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 MYL10Q9BUA6 226 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 OSBPL5Q9H0X9 879 aaPredicted RBP15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 EHD4Q9H223 541 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 USP40Q9NVE5 1235 aa15.61■□□□□ 0.09
TMEM50B-201ENST00000420455 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 SCNN1DP51172 638 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 RTN1Q16799 776 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 ATL3Q6DD88 541 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 SAP30BPQ9UHR5 308 aaKnown RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 MYH8P13535 1937 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 F8W031 263 aaPredicted RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 FIBPO43427 364 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 RXRAP19793 462 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 FAM47AQ5JRC9 791 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 RSBN1LQ6PCB5 846 aaPredicted RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 CPLX2Q6PUV4 134 aaKnown RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 RAB11FIP4Q86YS3 637 aa15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 CRACR2BQ8N4Y2 399 aaPredicted RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 RBM28Q9NW13 759 aaKnown RBP15.6■□□□□ 0.09
TMEM50B-201ENST00000420455 TFAP4Q01664 338 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 NEDD1Q8NHV4 660 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 H3BQV1 296 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 NMT2O60551 498 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 IFFO2Q5TF58 517 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 TTC6Q86TZ1 520 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 METTL16Q86W50 562 aaKnown RBP15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 PPFIA3O75145 1194 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 CATIPQ7Z7H3 387 aa15.59■□□□□ 0.09
TMEM50B-201ENST00000420455 ATRNL1Q5VV63 1379 aa15.58■□□□□ 0.09
TMEM50B-201ENST00000420455 MYH6P13533 1939 aa15.58■□□□□ 0.09
TMEM50B-201ENST00000420455 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 IARSP41252 1262 aaKnown RBP15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 ZNF277Q9NRM2 450 aaPredicted RBP15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 SWAP70Q9UH65 585 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 SYCE3A1L190 88 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 MTMR14Q8NCE2 650 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 C8orf76Q96K31 380 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 RNF26Q9BY78 433 aaPredicted RBP15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 ZNRF3Q9ULT6 936 aa15.58■□□□□ 0.08
TMEM50B-201ENST00000420455 UBE2HP62256 183 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 KRT85P78386 507 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 SSRP1Q08945 709 aaKnown RBP15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 SLC44A5Q8NCS7 719 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 MMP14P50281 582 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 WASF1Q92558 559 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 PHKBQ93100 1093 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 CCDC144CPQ8IYA2 1237 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 ZNF444Q8N0Y2 327 aaPredicted RBP15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 LARGE2Q8N3Y3 721 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 AGBL3Q8NEM8 1001 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 SCAND2PQ9GZW5 306 aaPredicted RBP15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 DHX36Q9H2U1 1008 aaKnown RBP15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 PCDHAC2Q9Y5I4 1007 aa15.57■□□□□ 0.08
TMEM50B-201ENST00000420455 NFKBIEO00221 500 aa15.56■□□□□ 0.08
TMEM50B-201ENST00000420455 PSMD14O00487 310 aa15.56■□□□□ 0.08
TMEM50B-201ENST00000420455 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
TMEM50B-201ENST00000420455 NFIAQ12857 509 aa15.56■□□□□ 0.08
TMEM50B-201ENST00000420455 TMTC3Q6ZXV5 915 aa15.56■□□□□ 0.08
TMEM50B-201ENST00000420455 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms