RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF1-205ENST00000419442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAPGEF1-205ENST00000419442 AS3MTQ9HBK9 375 aa13.13□□□□□ -0.31
RAPGEF1-205ENST00000419442 PDLIM7Q9NR12 457 aa13.13□□□□□ -0.31
RAPGEF1-205ENST00000419442 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
RAPGEF1-205ENST00000419442 BTDP43251 543 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 BACE1P56817 501 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 PICALMQ13492 652 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 ATP11BQ9Y2G3 1177 aa13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-205ENST00000419442 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 HOXC6P09630 235 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 MTMR2Q13614 643 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 C1orf53Q5VUE5 145 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 ATG9AQ7Z3C6 839 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 ADAMTS19Q8TE59 1207 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 EDC3Q96F86 508 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 ASB2Q96Q27 587 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 PRKRIP1Q9H875 184 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
RAPGEF1-205ENST00000419442 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 MAP4K4O95819 1239 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 PHKA1P46020 1223 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 TRPV1Q8NER1 839 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 THEGQ9P2T0 379 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
RAPGEF1-205ENST00000419442 BDP1A6H8Y1 2624 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 DNAJB2P25686 324 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 EPHB4P54760 987 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 RNPC3Q96LT9 517 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 FOCADQ5VW36 1801 aa13.09□□□□□ -0.31
RAPGEF1-205ENST00000419442 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 ASNSP08243 561 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 CYBAP13498 195 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 PTPREP23469 700 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 DDX10Q13206 875 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 CCAR1Q8IX12 1150 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
RAPGEF1-205ENST00000419442 USP17L10C9JJH3 530 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 CNMDO75829 334 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 CIAO1O76071 339 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 ITGB8P26012 769 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 CNGA1P29973 690 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 JAG1P78504 1218 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 MRPS5P82675 430 aaKnown RBP13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 GRB14Q14449 540 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
RAPGEF1-205ENST00000419442 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 KIAA0355O15063 1070 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 CYP2C19P33261 490 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 CCNA1P78396 465 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 SPTY2D1Q68D10 685 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 METTL16Q86W50 562 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
RAPGEF1-205ENST00000419442 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 MECOMQ03112 1051 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 TLE2Q04725 743 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms