RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 MYO1BO43795 1136 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 SERPINB2P05120 415 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RXRAP19793 462 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KLRK1P26718 216 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 HSPA1LP34931 641 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DYNLL1P63167 89 aaKnown RBP16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 TROAPQ12815 778 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 PTPAQ15257 358 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 RAB11FIP4Q86YS3 637 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
HLA-DPA1-242ENST00000419277 MROH7-TTC4A0A0A0MT08 1334 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 BECN2A8MW95 431 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TPM4P67936 248 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 CCDC144CPQ8IYA2 1237 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 ZNF202O95125 648 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 SYKP43405 635 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 GNAQP50148 359 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NDUFA8P51970 172 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FAM163AQ96GL9 167 aaPredicted RBP16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 MRFAP1L1Q96HT8 127 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PFKFB1P16118 471 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TRAPPC10P48553 1259 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TMTC3Q6ZXV5 915 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 LUZP1Q86V48 1076 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-DPA1-242ENST00000419277 A0A1B0GVL5 298 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NEMFO60524 1076 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PPFIA3O75145 1194 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 IQCB1Q15051 598 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 AIFM3Q96NN9 605 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PYM1Q9BRP8 204 aaKnown RBP16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 INCENPQ9NQS7 918 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 SH3GLB2Q9NR46 395 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 C10orf71Q711Q0 1435 aa16.74■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TSPY2A6NKD2 308 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 UFL1O94874 794 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 KRT2P35908 639 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 USP5P45974 858 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FUT2Q10981 343 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PHF20Q9BVI0 1012 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FAM205AQ6ZU69 1335 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PLSCR1O15162 318 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PTPREP23469 700 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 CALML3P27482 149 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 LZTS2Q9BRK4 669 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 CD209Q9NNX6 404 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
HLA-DPA1-242ENST00000419277 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 SMTNL1A8MU46 457 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 IKBKBO14920 756 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 ZNF75DP51815 510 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 GALNT17Q6IS24 598 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 FERMT2Q96AC1 680 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 TUBE1Q9UJT0 475 aa16.72■□□□□ 0.27
HLA-DPA1-242ENST00000419277 GAKO14976 1311 aa16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 WTIPA6NIX2 430 aaPredicted RBP16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 BTBD18B2RXH4 712 aa16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 NLRP12P59046 1061 aa16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 MYH1P12882 1939 aa16.71■□□□□ 0.27
HLA-DPA1-242ENST00000419277 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TPM2P07951 284 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 GPSM2P81274 684 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms