RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 PI4KBQ9UBF8 816 aa16.19■□□□□ 0.18
CHMP5-202ENST00000419016 SWAP70Q9UH65 585 aa16.19■□□□□ 0.18
CHMP5-202ENST00000419016 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
CHMP5-202ENST00000419016 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 SHMT1P34896 483 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
CHMP5-202ENST00000419016 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 NID2Q14112 1375 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 TSPY2A6NKD2 308 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 NMT2O60551 498 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 CTDNEP1O95476 244 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 NOVP48745 357 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
CHMP5-202ENST00000419016 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
CHMP5-202ENST00000419016 LLPHQ9BRT6 129 aaKnown RBP16.18■□□□□ 0.18
CHMP5-202ENST00000419016 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHMP5-202ENST00000419016 ERICH2A1L162 156 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 MYO1BO43795 1136 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 RCAN1P53805 252 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 PLIN4Q96Q06 1357 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
CHMP5-202ENST00000419016 GPR162Q16538 588 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
CHMP5-202ENST00000419016 NSUN7Q8NE18 718 aaKnown RBP16.17■□□□□ 0.18
CHMP5-202ENST00000419016 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
CHMP5-202ENST00000419016 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CHMP5-202ENST00000419016 H7C1D1 291 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 TSPY3P0CV98 308 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 TSPY8P0CW00 308 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 TATDN1Q6P1N9 297 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 SMC3Q9UQE7 1217 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 SLC12A7Q9Y666 1083 aa16.16■□□□□ 0.18
CHMP5-202ENST00000419016 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 CCDC69A6NI79 296 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 ZBTB43O43298 467 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 DTNBO60941 627 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 TBC1D10BQ4KMP7 808 aaPredicted RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 NFXL1Q6ZNB6 911 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 ZNF654Q8IZM8 581 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 JAK2O60674 1132 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 GJB2P29033 226 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 EPS15P42566 896 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 TROAPQ12815 778 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 PKP1Q13835 747 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 IFIT1BQ5T764 474 aaKnown RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 VEZTQ9HBM0 779 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 ZDHHC9Q9Y397 364 aa16.15■□□□□ 0.18
CHMP5-202ENST00000419016 ASTN2O75129 1339 aaPredicted RBP16.15■□□□□ 0.18
CHMP5-202ENST00000419016 AKR1B1P15121 316 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 CDC27P30260 824 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 CSRNP1Q96S65 589 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 TMEM39BQ9GZU3 492 aa16.14■□□□□ 0.17
CHMP5-202ENST00000419016 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
CHMP5-202ENST00000419016 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 NUCB2P80303 420 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 NTRK3Q16288 839 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 CDAN1Q8IWY9 1227 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 TRPM4Q8TD43 1214 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 TBC1D12O60347 775 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 RXRAP19793 462 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 CRACR2BQ8N4Y2 399 aaPredicted RBP16.13■□□□□ 0.17
CHMP5-202ENST00000419016 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
CHMP5-202ENST00000419016 GREB1LQ9C091 1923 aaPredicted RBP16.12■□□□□ 0.17
CHMP5-202ENST00000419016 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
CHMP5-202ENST00000419016 RASA3Q14644 834 aa16.12■□□□□ 0.17
CHMP5-202ENST00000419016 FANCBQ8NB91 859 aa16.12■□□□□ 0.17
CHMP5-202ENST00000419016 CEP95Q96GE4 821 aa16.12■□□□□ 0.17
CHMP5-202ENST00000419016 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
CHMP5-202ENST00000419016 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
CHMP5-202ENST00000419016 PTPDC1A2A3K4 754 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms