RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 HLA-DOAP06340 250 aa24.32■■□□□ 1.48
CASC3-203ENST00000418132 MICU3Q86XE3 530 aa24.32■■□□□ 1.48
CASC3-203ENST00000418132 ZBED3Q96IU2 234 aaPredicted RBP24.32■■□□□ 1.48
CASC3-203ENST00000418132 TCP11L1Q9NUJ3 509 aa24.32■■□□□ 1.48
CASC3-203ENST00000418132 COL2A1P02458 1487 aaPredicted RBP24.31■■□□□ 1.48
CASC3-203ENST00000418132 PTPDC1A2A3K4 754 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 STX6O43752 255 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 LMNB1P20700 586 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 PDCP20941 246 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 IFIT1BQ5T764 474 aaKnown RBP24.31■■□□□ 1.48
CASC3-203ENST00000418132 CLEC17AQ6ZS10 378 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 ZNF654Q8IZM8 581 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 NMT2O60551 498 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 TSPY3P0CV98 308 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 TSPY8P0CW00 308 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 ZNF280AP59817 542 aaPredicted RBP24.31■■□□□ 1.48
CASC3-203ENST00000418132 TCP10Q12799 353 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 CCDC178Q5BJE1 867 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 DPF2Q92785 391 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 MYL10Q9BUA6 226 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 IL17RBQ9NRM6 502 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 SWAP70Q9UH65 585 aa24.31■■□□□ 1.48
CASC3-203ENST00000418132 SBF1O95248 1867 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 SIPA1L1O43166 1804 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 GOLGA8AA7E2F4 631 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 RXRAP19793 462 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 LARP1BQ659C4 914 aaKnown RBP24.3■■□□□ 1.48
CASC3-203ENST00000418132 RCSD1Q6JBY9 416 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 DGKHQ86XP1 1220 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 ANKS1AQ92625 1134 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 FAM217BQ9NTX9 383 aaPredicted RBP24.3■■□□□ 1.48
CASC3-203ENST00000418132 TMOD2Q9NZR1 351 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 ZNF70Q9UC06 446 aaPredicted RBP24.3■■□□□ 1.48
CASC3-203ENST00000418132 TAOK2Q9UL54 1235 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 ATRNL1Q5VV63 1379 aa24.3■■□□□ 1.48
CASC3-203ENST00000418132 SPDYE2Q495Y8 402 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 SH3BP5LQ7L8J4 393 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 NEDD1Q8NHV4 660 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 DDTLA6NHG4 134 aaPredicted RBP24.29■■□□□ 1.48
CASC3-203ENST00000418132 CPLX1O14810 134 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 CDC27P30260 824 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 ADD1P35611 737 aaKnown RBP24.29■■□□□ 1.48
CASC3-203ENST00000418132 DDX11Q96FC9 970 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 MYOZ2Q9NPC6 264 aa24.29■■□□□ 1.48
CASC3-203ENST00000418132 FKBP1CQ5VVH2 108 aa24.28■■□□□ 1.48
CASC3-203ENST00000418132 PI4KBQ9UBF8 816 aa24.28■■□□□ 1.48
CASC3-203ENST00000418132 MYH8P13535 1937 aa24.28■■□□□ 1.48
CASC3-203ENST00000418132 ZNF541Q9H0D2 1346 aa24.28■■□□□ 1.48
CASC3-203ENST00000418132 PLIN4Q96Q06 1357 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 GMPSP49915 693 aaPredicted RBP24.27■■□□□ 1.48
CASC3-203ENST00000418132 MTMR6Q9Y217 621 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 KIF3AQ9Y496 699 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 ZSCAN22P10073 491 aaPredicted RBP24.27■■□□□ 1.48
CASC3-203ENST00000418132 PPP2R5BQ15173 497 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 NTRK3Q16288 839 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 CATIPQ7Z7H3 387 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 CCDC144CPQ8IYA2 1237 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 FAM184AQ8NB25 1140 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 GBP4Q96PP9 640 aa24.27■■□□□ 1.48
CASC3-203ENST00000418132 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 CLRN2A0PK11 232 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 WNT10BO00744 389 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 FDPSP14324 419 aaKnown RBP24.26■■□□□ 1.47
CASC3-203ENST00000418132 SHMT1P34896 483 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 TROAPQ12815 778 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 GSE1Q14687 1217 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 CPLX2Q6PUV4 134 aaKnown RBP24.26■■□□□ 1.47
CASC3-203ENST00000418132 FANCBQ8NB91 859 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 GJA3Q9Y6H8 435 aa24.26■■□□□ 1.47
CASC3-203ENST00000418132 CDKL5O76039 1030 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 DDAH1O94760 285 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 CALM1P0DP23 149 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 CALM2P0DP24 149 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 CALM3P0DP25 149 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 YBX3P16989 372 aaKnown RBP eCLIP24.25■■□□□ 1.47
CASC3-203ENST00000418132 RTN1Q16799 776 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 METTL16Q86W50 562 aaKnown RBP24.25■■□□□ 1.47
CASC3-203ENST00000418132 ZSCAN29Q8IWY8 852 aaPredicted RBP24.25■■□□□ 1.47
CASC3-203ENST00000418132 CCDC196A0A1B0GTZ2 297 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 MYO1BO43795 1136 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 MCM4P33991 863 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 FOXD4L5Q5VV16 416 aaPredicted RBP24.25■■□□□ 1.47
CASC3-203ENST00000418132 FOXP4Q8IVH2 680 aaPredicted RBP24.25■■□□□ 1.47
CASC3-203ENST00000418132 FAM151AQ8WW52 585 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 FOXD4L4Q8WXT5 416 aaPredicted RBP24.25■■□□□ 1.47
CASC3-203ENST00000418132 DNAJC18Q9H819 358 aa24.25■■□□□ 1.47
CASC3-203ENST00000418132 NOVP48745 357 aa24.24■■□□□ 1.47
CASC3-203ENST00000418132 NUP133Q8WUM0 1156 aa24.24■■□□□ 1.47
CASC3-203ENST00000418132 CNTNAP1P78357 1384 aa24.24■■□□□ 1.47
CASC3-203ENST00000418132 TCP10L2B9ZVM9 353 aa24.23■■□□□ 1.47
CASC3-203ENST00000418132 BAG4O95429 457 aaKnown RBP24.23■■□□□ 1.47
CASC3-203ENST00000418132 NBPF9Q3BBW0 867 aa24.23■■□□□ 1.47
CASC3-203ENST00000418132 MICALL2Q8IY33 904 aa24.23■■□□□ 1.47
CASC3-203ENST00000418132 CRACR2BQ8N4Y2 399 aaPredicted RBP24.23■■□□□ 1.47
CASC3-203ENST00000418132 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.23■■□□□ 1.47
CASC3-203ENST00000418132 CNOT7Q9UIV1 285 aaKnown RBP24.23■■□□□ 1.47
CASC3-203ENST00000418132 VPS37CA5D8V6 355 aaPredicted RBP24.23■■□□□ 1.47
CASC3-203ENST00000418132 IFNAR1P17181 557 aa24.23■■□□□ 1.47
CASC3-203ENST00000418132 FAM83AQ86UY5 434 aa24.23■■□□□ 1.47
CASC3-203ENST00000418132 KAT14Q9H8E8 782 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms