RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LRSAM1Q6UWE0 723 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 C16orf86Q6ZW13 317 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
SSBP3-205ENST00000417664 TEKT1Q969V4 418 aa19.5■□□□□ 0.71
SSBP3-205ENST00000417664 FOSBP53539 338 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 NBPF11Q86T75 865 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 GAS2L3Q86XJ1 694 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 RTKN2Q8IZC4 609 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 FOCADQ5VW36 1801 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 TFAP4Q01664 338 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 KIF23Q02241 960 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-205ENST00000417664 FAM47AQ5JRC9 791 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 KRT40Q6A162 431 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 RTEL1Q9NZ71 1219 aa19.49■□□□□ 0.71
SSBP3-205ENST00000417664 ECE2O60344 883 aa19.48■□□□□ 0.71
SSBP3-205ENST00000417664 PLCD1P51178 756 aa19.48■□□□□ 0.71
SSBP3-205ENST00000417664 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
SSBP3-205ENST00000417664 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-205ENST00000417664 USP17L3A6NCW0 530 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 USP17L4A6NCW7 530 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 XBP1P17861 261 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 KIF5BP33176 963 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 EVX2Q03828 476 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 CCDC93Q567U6 631 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 MYSM1Q5VVJ2 828 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 USP17L1Q7RTZ2 530 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 CTCFLQ8NI51 663 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-205ENST00000417664 ZDHHC15Q96MV8 337 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 POLR3EQ9NVU0 708 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
SSBP3-205ENST00000417664 SYCE3A1L190 88 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 PRPF3O43395 683 aaKnown RBP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 YEATS4O95619 227 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 XRCC6P12956 609 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 U2AF2P26368 475 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 SAFBQ15424 915 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 DACT2Q5SW24 774 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 OTUD7BQ6GQQ9 843 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 RCSD1Q6JBY9 416 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 PSMD1Q99460 953 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 PDGFDQ9GZP0 370 aaPredicted RBP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 KAT14Q9H8E8 782 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 SAP30BPQ9UHR5 308 aaKnown RBP19.46■□□□□ 0.71
SSBP3-205ENST00000417664 RASA1P20936 1047 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 CDK8P49336 464 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 SOGA3Q5TF21 947 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 MYH1P12882 1939 aa19.46■□□□□ 0.71
SSBP3-205ENST00000417664 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
SSBP3-205ENST00000417664 CRKP46108 304 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 FUT2Q10981 343 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
SSBP3-205ENST00000417664 TMTC3Q6ZXV5 915 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 KCNG4Q8TDN1 519 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 AIFM3Q96NN9 605 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 DDX19AQ9NUU7 478 aaKnown RBP19.45■□□□□ 0.7
SSBP3-205ENST00000417664 USP40Q9NVE5 1235 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 MYO3BQ8WXR4 1341 aa19.45■□□□□ 0.7
SSBP3-205ENST00000417664 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 WDHD1O75717 1129 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-205ENST00000417664 MMP1P03956 469 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 NASPP49321 788 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-205ENST00000417664 GNAQP50148 359 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 AOC3Q16853 763 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
SSBP3-205ENST00000417664 NEDD1Q8NHV4 660 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 IL17RBQ9NRM6 502 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 SERPINA10Q9UK55 444 aa19.44■□□□□ 0.7
SSBP3-205ENST00000417664 C21orf2O43822 256 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 NMT2O60551 498 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
SSBP3-205ENST00000417664 TGFB2P61812 414 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 PGBD1Q96JS3 809 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 FOXP1Q9H334 677 aaPredicted RBP19.43■□□□□ 0.7
SSBP3-205ENST00000417664 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
SSBP3-205ENST00000417664 SWAP70Q9UH65 585 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 ECM29Q5VYK3 1845 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 PPIP5K2O43314 1243 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 SCNN1DP51172 638 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 GABPAQ06546 454 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 SLC4A8Q2Y0W8 1093 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 CDC42EP5Q6NZY7 148 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 LINC00301Q8NCQ3 95 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 PNMA1Q8ND90 353 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 BICD2Q8TD16 824 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 GJB4Q9NTQ9 266 aa19.43■□□□□ 0.7
SSBP3-205ENST00000417664 KIF28PB7ZC32 967 aa19.42■□□□□ 0.7
SSBP3-205ENST00000417664 KCNA3P22001 575 aa19.42■□□□□ 0.7
SSBP3-205ENST00000417664 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.42■□□□□ 0.7
SSBP3-205ENST00000417664 MXD3Q9BW11 206 aa19.42■□□□□ 0.7
SSBP3-205ENST00000417664 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
SSBP3-205ENST00000417664 PLIN4Q96Q06 1357 aa19.42■□□□□ 0.7
SSBP3-205ENST00000417664 HLA-DOAP06340 250 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 DPEP1P16444 411 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms