RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 B4E1Z4 1266 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 PPP1R12BO60237 982 aaPredicted RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 RANBP6O60518 1105 aaKnown RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 KDM4AO75164 1064 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 CAP2P40123 477 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 RRP12Q5JTH9 1297 aaKnown RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
SYNC-203ENST00000417633 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
SYNC-203ENST00000417633 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 TRAF5O00463 557 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
SYNC-203ENST00000417633 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
SYNC-203ENST00000417633 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 MCM5P33992 734 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 FKBP1BP68106 108 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 TFAP4Q01664 338 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
SYNC-203ENST00000417633 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 ALDH8A1Q9H2A2 487 aaPredicted RBP13.65□□□□□ -0.22
SYNC-203ENST00000417633 PLIN4Q96Q06 1357 aa13.65□□□□□ -0.22
SYNC-203ENST00000417633 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 TRPM7Q96QT4 1865 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 AKR1B1P15121 316 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
SYNC-203ENST00000417633 ANTXR2P58335 489 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNC-203ENST00000417633 RABEP1Q15276 862 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
SYNC-203ENST00000417633 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNC-203ENST00000417633 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNC-203ENST00000417633 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
SYNC-203ENST00000417633 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
SYNC-203ENST00000417633 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 GUCY1A2P33402 732 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 NOVP48745 357 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 JAG1P78504 1218 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 FSTL1Q12841 308 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 IGDCC4Q8TDY8 1250 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 ANKS1AQ92625 1134 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 TMEM87BQ96K49 555 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 AGXT2Q9BYV1 514 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
SYNC-203ENST00000417633 PRC1O43663 620 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 CELF2O95319 508 aaKnown RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 GDF11O95390 407 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 GH2P01242 217 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 ASNSP08243 561 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 CPA1P15085 419 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 INPP5BP32019 993 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 LDLRAD1Q5T700 205 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 CST9Q5W186 159 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 DGKHQ86XP1 1220 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 TTC14Q96N46 770 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 ZSCAN10Q96SZ4 725 aaPredicted RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 KANSL2Q9H9L4 492 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 GBA2Q9HCG7 927 aaPredicted RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
SYNC-203ENST00000417633 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
SYNC-203ENST00000417633 PAPPA2Q9BXP8 1791 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
SYNC-203ENST00000417633 NEK4P51957 841 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 PRKG1Q13976 671 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 SART3Q15020 963 aaKnown RBP13.61□□□□□ -0.23
SYNC-203ENST00000417633 SEC23AQ15436 765 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 ANKRD13AQ8IZ07 590 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 C2orf69Q8N8R5 385 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 CEP95Q96GE4 821 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 MTMR4Q9NYA4 1195 aa13.61□□□□□ -0.23
SYNC-203ENST00000417633 ERICH2A1L162 156 aa13.6□□□□□ -0.23
SYNC-203ENST00000417633 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms