RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 TRIM34Q9BYJ4 488 aa19.03■□□□□ 0.64
RHBDF1-202ENST00000417043 USP5P45974 858 aa19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 BACE1P56817 501 aa19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 NKX2-3Q8TAU0 364 aa19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 U2AF1L4Q8WU68 220 aaKnown RBP19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 DPF3Q92784 378 aa19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 COLQQ9Y215 455 aaPredicted RBP19.02■□□□□ 0.64
RHBDF1-202ENST00000417043 GCLCP48506 637 aaPredicted RBP19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 PABPC4Q13310 644 aaKnown RBP eCLIP19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 IRF5Q13568 498 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 UBE2Q1Q7Z7E8 422 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 PXYLP1Q8TE99 480 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 TMOD4Q9NZQ9 345 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 ZBTB21Q9ULJ3 1066 aa19.01■□□□□ 0.63
RHBDF1-202ENST00000417043 SGPL1O95470 568 aa19■□□□□ 0.63
RHBDF1-202ENST00000417043 HLA-DOAP06340 250 aa19■□□□□ 0.63
RHBDF1-202ENST00000417043 MAP3K12Q12852 859 aa19■□□□□ 0.63
RHBDF1-202ENST00000417043 ERC1Q8IUD2 1116 aa19■□□□□ 0.63
RHBDF1-202ENST00000417043 COG6Q9Y2V7 657 aa19■□□□□ 0.63
RHBDF1-202ENST00000417043 USP17L10C9JJH3 530 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 IGSF3O75054 1194 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 GH2P01242 217 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 IRX3P78415 501 aaPredicted RBP18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 DEFB118Q96PH6 123 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 GJD2Q9UKL4 321 aa18.99■□□□□ 0.63
RHBDF1-202ENST00000417043 TRIOBPQ9H2D6 2365 aa18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 PLXNB2O15031 1838 aa18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 TFRCP02786 760 aaKnown RBP18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 HOXA7P31268 230 aaPredicted RBP18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 TRIM32Q13049 653 aa18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 EMILIN3Q9NT22 766 aa18.98■□□□□ 0.63
RHBDF1-202ENST00000417043 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 HERVK_113P62684 666 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 EVX2Q03828 476 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 ZYXQ15942 572 aaKnown RBP18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 Q3C1V9 767 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 HSP90AB4PQ58FF6 505 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 POTEEQ6S8J3 1075 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 RIOK1Q9BRS2 568 aaKnown RBP18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 PCDH10Q9P2E7 1040 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 MORF4L1Q9UBU8 362 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 SERPINB13Q9UIV8 391 aa18.97■□□□□ 0.63
RHBDF1-202ENST00000417043 PLCD1P51178 756 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 SLC9C2Q5TAH2 1124 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 TATDN1Q6P1N9 297 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 PAK6Q9NQU5 681 aaPredicted RBP18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 GINM1Q9NU53 330 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 RBPJLQ9UBG7 517 aa18.96■□□□□ 0.63
RHBDF1-202ENST00000417043 RANBP2P49792 3224 aaKnown RBP18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 MAGEB6P1A0A0J9YX57 407 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 GOLIM4O00461 696 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 MS4A1P11836 297 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 PDE6AP16499 860 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 CYP2B6P20813 491 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 FXR1P51114 621 aaKnown RBP eCLIP18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 RAB3GAP1Q15042 981 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 SLFNL1Q499Z3 407 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 USP17L2Q6R6M4 530 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 CHRDL2Q6WN34 429 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 RPAP2Q8IXW5 612 aaPredicted RBP18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 CLASRPQ8N2M8 674 aaKnown RBP18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
RHBDF1-202ENST00000417043 IFIT2P09913 472 aaKnown RBP18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 CERKLQ49MI3 558 aaPredicted RBP18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 TTC6Q86TZ1 520 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 CERS3Q8IU89 383 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 GPRC5AQ8NFJ5 357 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 ACER1Q8TDN7 264 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 PAGR1Q9BTK6 254 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 HTATIP2Q9BUP3 242 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 EHD4Q9H223 541 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 DDX19BQ9UMR2 479 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 ZNF532Q9HCE3 1301 aa18.94■□□□□ 0.62
RHBDF1-202ENST00000417043 HMGCRP04035 888 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 SHMT1P34896 483 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 TTF1Q15361 905 aaPredicted RBP18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 ABCB5Q2M3G0 1257 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 TRIB2Q92519 343 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 CRISPLD2Q9H0B8 497 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 PORCNQ9H237 461 aa18.93■□□□□ 0.62
RHBDF1-202ENST00000417043 TCRBV5S4A2TA0A5A2 114 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 HMMRO75330 724 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 ERVK-9P63128 1117 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 ERVK-24P63145 666 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 DIS3LQ8TF46 1054 aaKnown RBP18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 SDR42E1Q8WUS8 393 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 FEZ1Q99689 392 aa18.92■□□□□ 0.62
RHBDF1-202ENST00000417043 NAV1Q8NEY1 1877 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms