RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
CPNE1-210ENST00000416778 PDE4DIPQ5VU43 2346 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 SLFNL1Q499Z3 407 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-210ENST00000416778 PNMA3Q9UL41 463 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 ZBTB21Q9ULJ3 1066 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 GABRQQ9UN88 632 aa21.66■■□□□ 1.06
CPNE1-210ENST00000416778 MYPNQ86TC9 1320 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 SIPA1L1O43166 1804 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 USP17L10C9JJH3 530 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 HOXA7P31268 230 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-210ENST00000416778 PRKCZQ05513 592 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.06
CPNE1-210ENST00000416778 MTMR2Q13614 643 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 RAET1EQ8TD07 263 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 CRNKL1Q9BZJ0 848 aaKnown RBP21.65■■□□□ 1.06
CPNE1-210ENST00000416778 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
CPNE1-210ENST00000416778 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-210ENST00000416778 GH2P01242 217 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 GRK4P32298 578 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 ADD2P35612 726 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 GCLCP48506 637 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-210ENST00000416778 LCORLQ8N3X6 602 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 P2RX7Q99572 595 aaKnown RBP21.64■■□□□ 1.05
CPNE1-210ENST00000416778 EMILIN3Q9NT22 766 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 PCDHB15Q9Y5E8 787 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 ZSWIM8A7E2V4 1837 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 BRCA2P51587 3418 aa21.64■■□□□ 1.05
CPNE1-210ENST00000416778 MKI67P46013 3256 aaKnown RBP21.63■■□□□ 1.05
CPNE1-210ENST00000416778 POLR3DP05423 398 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-210ENST00000416778 GABPAQ06546 454 aa21.63■■□□□ 1.05
CPNE1-210ENST00000416778 CERKLQ49MI3 558 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-210ENST00000416778 DCP1AQ9NPI6 582 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-210ENST00000416778 TMOD4Q9NZQ9 345 aa21.63■■□□□ 1.05
CPNE1-210ENST00000416778 PTPRFP10586 1907 aa21.63■■□□□ 1.05
CPNE1-210ENST00000416778 CDK5RAP2Q96SN8 1893 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 CHGBP05060 677 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 SHMT1P34896 483 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 FLT3LGP49771 235 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 EVX2Q03828 476 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 MTFR1Q15390 333 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 FAM110CQ1W6H9 321 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 MCM9Q9NXL9 1143 aa21.62■■□□□ 1.05
CPNE1-210ENST00000416778 PRKAB2O43741 272 aa21.61■■□□□ 1.05
CPNE1-210ENST00000416778 UBE3CQ15386 1083 aa21.61■■□□□ 1.05
CPNE1-210ENST00000416778 ABCB5Q2M3G0 1257 aa21.61■■□□□ 1.05
CPNE1-210ENST00000416778 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.61■■□□□ 1.056e-7■■■■■ 30.8
CPNE1-210ENST00000416778 ECHDC1Q9NTX5 307 aa21.61■■□□□ 1.05
CPNE1-210ENST00000416778 FOCADQ5VW36 1801 aa21.61■■□□□ 1.05
CPNE1-210ENST00000416778 TNPO2O14787 897 aaKnown RBP21.6■■□□□ 1.05
CPNE1-210ENST00000416778 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
CPNE1-210ENST00000416778 USP17L2Q6R6M4 530 aa21.6■■□□□ 1.05
CPNE1-210ENST00000416778 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
CPNE1-210ENST00000416778 ADCY3O60266 1144 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 IRF5Q13568 498 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 POTEEQ6S8J3 1075 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 RBPJLQ9UBG7 517 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 GJD2Q9UKL4 321 aa21.59■■□□□ 1.05
CPNE1-210ENST00000416778 MBD4O95243 580 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 CYP2D6P10635 497 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-210ENST00000416778 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 PRPF38BQ5VTL8 546 aaKnown RBP21.58■■□□□ 1.05
CPNE1-210ENST00000416778 SLAIN1Q8ND83 568 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 ACER1Q8TDN7 264 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 PXYLP1Q8TE99 480 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 COA7Q96BR5 231 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 CABP5Q9NP86 173 aa21.58■■□□□ 1.05
CPNE1-210ENST00000416778 PEX10O60683 326 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 CCL5P13501 91 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
CPNE1-210ENST00000416778 HERVK_113P62684 666 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 Q3C1V9 767 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
CPNE1-210ENST00000416778 TXNRD2Q9NNW7 524 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 BIN2Q9UBW5 565 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-210ENST00000416778 MYH1P12882 1939 aa21.57■■□□□ 1.04
CPNE1-210ENST00000416778 GPRC5AQ8NFJ5 357 aa21.56■■□□□ 1.04
CPNE1-210ENST00000416778 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
CPNE1-210ENST00000416778 ATAD5Q96QE3 1844 aa21.56■■□□□ 1.04
CPNE1-210ENST00000416778 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 GJB1P08034 283 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 ELNP15502 786 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 UBXN2AP68543 259 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 SEPT2Q15019 361 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 C12orf60Q5U649 245 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 DYNLL2Q96FJ2 89 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 RNF208Q9H0X6 261 aa21.55■■□□□ 1.04
CPNE1-210ENST00000416778 LOC285556D6RIA3 1793 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L15C9J2P7 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L13C9JLJ4 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L12C9JPN9 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L11C9JVI0 530 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms