RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 FRMPD2Q68DX3 1309 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 TK2O00142 265 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ZBTB39O15060 712 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 GREM1O60565 184 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 MBD4O95243 580 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 GJB6O95452 261 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PGRP06401 933 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 IMPDH2P12268 514 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 VCAM1P19320 739 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 RPS6KB1P23443 525 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 UBA7P41226 1012 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ZAP70P43403 619 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 GTF2A2P52657 109 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 CLNS1AP54105 237 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 NAP1L1P55209 391 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PFKPQ01813 784 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ROR1Q01973 937 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 BTKQ06187 659 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 MAP7Q14244 749 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 HSP90AA2PQ14568 343 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 DHCR24Q15392 516 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 UVSSAQ2YD98 709 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 RGL3Q3MIN7 710 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 HSP90B2PQ58FF3 399 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SNAP47Q5SQN1 464 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 INTS11Q5TA45 600 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SPATA1Q5VX52 437 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 KLHL10Q6JEL2 608 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PRPF40BQ6NWY9 871 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 FBXL19Q6PCT2 694 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 CCDC81Q6ZN84 652 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 C1orf122Q6ZSJ8 110 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SH3RF1Q7Z6J0 888 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ERC1Q8IUD2 1116 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ANKRD18AQ8IVF6 992 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SLITRK4Q8IW52 837 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 LRRC47Q8N1G4 583 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 LEO1Q8WVC0 666 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 POF1BQ8WVV4 589 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SLC7A3Q8WY07 619 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 TBC1D20Q96BZ9 403 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 GCC1Q96CN9 775 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ZBTB10Q96DT7 871 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SPAG5Q96R06 1193 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ISCA1Q9BUE6 129 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 TARS2Q9BW92 718 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 MRPL9Q9BYD2 267 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 ADAM33Q9BZ11 813 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 XPO4Q9C0E2 1151 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 CCDC8Q9H0W5 538 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 OSBPL5Q9H0X9 879 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 TCF7L1Q9HCS4 588 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SMC4Q9NTJ3 1288 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 UBP1Q9NZI7 540 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 TRHDEQ9UKU6 1024 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 TPCN1Q9ULQ1 816 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PPT2Q9UMR5 302 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PCDHB11Q9Y5F2 797 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 LRRFIP2Q9Y608 721 aaKnown RBP3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 PARP3Q9Y6F1 533 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 IKBKGQ9Y6K9 419 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 SLC4A7Q9Y6M7 1214 aa3.68□□□□□ -1.82
CTDSPL-203ENST00000416688 A0A087WZG4 1122 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 A0A1B0GVC2 190 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ANKRD18BA2A2Z9 1011 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 PMM2O15305 246 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 PLOD3O60568 738 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TLR5O60602 858 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ARIH2O95376 493 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 IGHDP01880 384 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 IFIT1P09914 478 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 RAC2P15153 192 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 RPL17P18621 184 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 GTF2E1P29083 439 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 HOXC13P31276 330 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 CCNFP41002 786 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 GRK6P43250 576 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ZNF165P49910 485 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TMED1Q13445 227 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 STAT4Q14765 748 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 PLCB4Q15147 1175 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 PTPN21Q16825 1174 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ZC3H12AQ5D1E8 599 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 RILPL1Q5EBL4 403 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 VPS53Q5VIR6 699 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 LMBRD2Q68DH5 695 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 HIBCHQ6NVY1 386 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 NXPE4Q6UWF7 544 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ARHGEF25Q86VW2 580 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TPH2Q8IWU9 490 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 SEPT12Q8IYM1 358 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TNS4Q8IZW8 715 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 CCAR2Q8N163 923 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 CNTD1Q8N815 330 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 FAM169BQ8N8A8 192 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ZNF513Q8N8E2 541 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ZBTB38Q8NAP3 1195 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms