RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-203ENST00000416188 ACTN2P35609 894 aa17.56■□□□□ 0.4
PHRF1-203ENST00000416188 HLFQ16534 295 aa17.56■□□□□ 0.4
PHRF1-203ENST00000416188 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
PHRF1-203ENST00000416188 MKRN3Q13064 507 aaKnown RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 NCAPG2Q86XI2 1143 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 SDR42E1Q8WUS8 393 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 EDC3Q96F86 508 aaKnown RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 FLOT1O75955 427 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 V9GYY5 206 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 IREB2P48200 963 aaKnown RBP17.55■□□□□ 0.4
PHRF1-203ENST00000416188 CARMIL3Q8ND23 1372 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 GLI2P10070 1586 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 IFNKQ9P0W0 207 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 A0A1B0GVL5 298 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 ALAS1P13196 640 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
PHRF1-203ENST00000416188 AOX1Q06278 1338 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 FAM47CQ5HY64 1035 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 APBB1IPQ7Z5R6 666 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-203ENST00000416188 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 MCM6Q14566 821 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-203ENST00000416188 SLC10A4Q96EP9 437 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 SYNCQ9H7C4 482 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 ARFGAP3Q9NP61 516 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 CCNA1P78396 465 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 MICALCLQ6ZW33 695 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 TACC1O75410 805 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 TAF12Q16514 161 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 ANKRD35Q8N283 1001 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 CCDC42Q96M95 316 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 PLVAPQ9BX97 442 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
PHRF1-203ENST00000416188 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-203ENST00000416188 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-203ENST00000416188 IMPG2Q9BZV3 1241 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 COPRSQ9NQ92 184 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 CEP152O94986 1710 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 CIAO1O76071 339 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 CEP112Q8N8E3 955 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 IQUBQ8NA54 791 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 ADORA1P30542 326 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 ADCY7P51828 1080 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 KIF5AQ12840 1032 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 DEFB132Q7Z7B7 95 aa17.53■□□□□ 0.4
PHRF1-203ENST00000416188 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 UBXN1Q04323 297 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
PHRF1-203ENST00000416188 M0QZ92 97 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 DDX39AO00148 427 aaKnown RBP17.52■□□□□ 0.39
PHRF1-203ENST00000416188 HSF2BPO75031 334 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 OSBPP22059 807 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 SYNE4Q8N205 404 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-203ENST00000416188 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-203ENST00000416188 SLC27A2O14975 620 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 DEXIO95424 95 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.39
PHRF1-203ENST00000416188 DPP9Q86TI2 863 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 LZTFL1Q9NQ48 299 aa17.52■□□□□ 0.39
PHRF1-203ENST00000416188 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-203ENST00000416188 VWA3AA6NCI4 1184 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 DKC1O60832 514 aaKnown RBP eCLIP17.51■□□□□ 0.39
PHRF1-203ENST00000416188 RPS6KB1P23443 525 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 TBC1D10BQ4KMP7 808 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-203ENST00000416188 GRIPAP1Q4V328 841 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 ZNF174Q15697 407 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 FAM173BQ6P4H8 233 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 ABCC4O15439 1325 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 RRAGDQ9NQL2 400 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-203ENST00000416188 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 KRT86O43790 486 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 HS2ST1Q7LGA3 356 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
PHRF1-203ENST00000416188 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
PHRF1-203ENST00000416188 CTAGE9A4FU28 777 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 KRT83P78385 493 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 NFIXQ14938 502 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 SELENOOQ9BVL4 669 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 KCTD2Q14681 263 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms