RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 DHX36Q9H2U1 1008 aaKnown RBP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHRNA1-206ENST00000416004 PRKAB2O43741 272 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 CYP21A2P08686 494 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 NEK4P51957 841 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 PPIL2Q13356 520 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 CTU1Q7Z7A3 348 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 CFHR5Q9BXR6 569 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 ZFYVE28Q9HCC9 887 aa10.94□□□□□ -0.66
CHRNA1-206ENST00000416004 GPR25O00155 361 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 FGAP02671 866 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 USP5P45974 858 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 DYNLL1P63167 89 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 BECN1Q14457 450 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 CRACR2BQ8N4Y2 399 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 ABHD8Q96I13 439 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 JAKMIP1Q96N16 626 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 EPB41L4AQ9HCS5 686 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 KIF22Q14807 665 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 TAF1CQ15572 869 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 NOL9Q5SY16 702 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 SCYL3Q8IZE3 742 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 ERO1AQ96HE7 468 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 MCOLN1Q9GZU1 580 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 OSBPL5Q9H0X9 879 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 ZCCHC17Q9NP64 241 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 PI4KBQ9UBF8 816 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 SNCAIPQ9Y6H5 919 aa10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 COL2A1P02458 1487 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-206ENST00000416004 DOCK1Q14185 1865 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 FOCADQ5VW36 1801 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 GSG1L2A8MUP6 293 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 CTNND1O60716 968 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 INPP5BP32019 993 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 RHBDL3P58872 404 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 PPP4CP60510 307 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 RNF20Q5VTR2 975 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 ZNF296Q8WUU4 475 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 ZNF112Q9UJU3 913 aa10.92□□□□□ -0.66
CHRNA1-206ENST00000416004 ATRNL1Q5VV63 1379 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 TBC1D12O60347 775 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 HAND2P61296 217 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 GSE1Q14687 1217 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 TGFBRAP1Q8WUH2 860 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 TTC14Q96N46 770 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 NBPF3Q9H094 633 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 MYH1P12882 1939 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 DDTLA6NHG4 134 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 IGF2BP3O00425 579 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 CXCL11O14625 94 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 IRF6O14896 467 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 APPP05067 770 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 GJA5P36382 358 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 ZFPM1Q8IX07 1006 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 AMOTL1Q8IY63 956 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
CHRNA1-206ENST00000416004 CDK5RAP2Q96SN8 1893 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 ATAD5Q96QE3 1844 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 ST18O60284 1047 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 SP3Q02447 781 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 CRHR2Q13324 411 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 TTC6Q86TZ1 520 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 FOXP4Q8IVH2 680 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 MAPKAPK5Q8IW41 473 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 IFNL3Q8IZI9 196 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 CNKSR2Q8WXI2 1034 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 TCEANC2Q96MN5 208 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 CRNKL1Q9BZJ0 848 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
CHRNA1-206ENST00000416004 FLT1P17948 1338 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 E7EWF7 191 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 SMIM22K7EJ46 135 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 ALX1Q15699 326 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms