RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 JAG2Q9Y219 1238 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 LAMB1P07942 1786 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 SMTNL1A8MU46 457 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 SMC2O95347 1197 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 SPECC1Q5M775 1068 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 LRRC8AQ8IWT6 810 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
UBA3-203ENST00000415609 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 TUBE1Q9UJT0 475 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
UBA3-203ENST00000415609 NEMFO60524 1076 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 PLEKHA8P1O95397 391 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 RFC4P35249 363 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 EVX2Q03828 476 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 ARID5BQ14865 1188 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 LONRF3Q496Y0 759 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 DZIP1Q86YF9 867 aaKnown RBP14.21□□□□□ -0.13
UBA3-203ENST00000415609 DCP1AQ9NPI6 582 aaPredicted RBP14.21□□□□□ -0.13
UBA3-203ENST00000415609 RBM28Q9NW13 759 aaKnown RBP14.21□□□□□ -0.13
UBA3-203ENST00000415609 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 VPS54Q9P1Q0 977 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 PCDHB6Q9Y5E3 794 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 THSD7AQ9UPZ6 1657 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 DLEC1Q9Y238 1755 aa14.21□□□□□ -0.13
UBA3-203ENST00000415609 hCG_1642624A0A1W2PR95 340 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 FGRP09769 529 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 CALM1P0DP23 149 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 CALM2P0DP24 149 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 CALM3P0DP25 149 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 TXNRD3Q86VQ6 643 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 FBXO2Q9UK22 296 aaPredicted RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 CEP131Q9UPN4 1083 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
UBA3-203ENST00000415609 CCDC88AQ3V6T2 1871 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 DDAH1O94760 285 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 TM4SF1P30408 202 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 GRIN1Q05586 938 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 C16orf45Q96MC5 204 aaPredicted RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 XPO4Q9C0E2 1151 aaKnown RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
UBA3-203ENST00000415609 ARPP21Q9UBL0 812 aaPredicted RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 HOOK1Q9UJC3 728 aaKnown RBP14.2□□□□□ -0.14
UBA3-203ENST00000415609 TAF1LQ8IZX4 1826 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 IKBKBO14920 756 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 ORC4O43929 436 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 CYP2D6P10635 497 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 PTPREP23469 700 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 KRT2P35908 639 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 TROAPQ12815 778 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 NCAPHQ15003 741 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 PKN1Q16512 942 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 FAM47AQ5JRC9 791 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 V9GY48 417 aaPredicted RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 NMT2O60551 498 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 SKILP12757 684 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 FUT2Q10981 343 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 TPD52L1Q16890 204 aaPredicted RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 TRAPPC3LQ5T215 181 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 OLFM4Q6UX06 510 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
UBA3-203ENST00000415609 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
UBA3-203ENST00000415609 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 LY75O60449 1722 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 GSDMDP57764 484 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 PDE4BQ07343 736 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 SLC4A8Q2Y0W8 1093 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 TMTC3Q6ZXV5 915 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 BRMS1Q9HCU9 246 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 MCM9Q9NXL9 1143 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 PCDHA5Q9Y5H7 936 aa14.18□□□□□ -0.14
UBA3-203ENST00000415609 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 TRIM75PA6NK02 468 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 TSPY2A6NKD2 308 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 FOXN1O15353 648 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 POLR2DO15514 142 aaKnown RBP14.17□□□□□ -0.14
UBA3-203ENST00000415609 MYL5Q02045 173 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 GRAPQ13588 217 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 TMED8Q6PL24 325 aaPredicted RBP14.17□□□□□ -0.14
UBA3-203ENST00000415609 TMC6Q7Z403 805 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 SLC51AQ86UW1 340 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 GRAPLQ8TC17 118 aaPredicted RBP14.17□□□□□ -0.14
UBA3-203ENST00000415609 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 SRPRBQ9Y5M8 271 aaKnown RBP14.17□□□□□ -0.14
UBA3-203ENST00000415609 SBF2Q86WG5 1849 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 IRS2Q9Y4H2 1338 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 LDHBP07195 334 aaKnown RBP14.17□□□□□ -0.14
UBA3-203ENST00000415609 GTF2F1P35269 517 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBA3-203ENST00000415609 CCZ1BP86790 482 aa14.17□□□□□ -0.14
UBA3-203ENST00000415609 CCZ1P86791 482 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms