RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 PBX1P40424 430 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
C2CD3-204ENST00000414160 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 TRIML1Q8N9V2 468 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
C2CD3-204ENST00000414160 NAA15Q9BXJ9 866 aaKnown RBP11.56□□□□□ -0.56
C2CD3-204ENST00000414160 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 AKAP2Q9Y2D5 859 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 PCDHB6Q9Y5E3 794 aa11.56□□□□□ -0.56
C2CD3-204ENST00000414160 CTAGE9A4FU28 777 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 ERLIN1O75477 346 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 APPP05067 770 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CASP14P31944 242 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 STX17P56962 302 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 SSRP1Q08945 709 aaKnown RBP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CASP8Q14790 479 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 DIS3L2Q8IYB7 885 aaKnown RBP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 ADD3Q9UEY8 706 aaKnown RBP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 SPATA31A6Q5VVP1 1343 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 MAP3K15Q6ZN16 1313 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 PHACTR2O75167 634 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 MMP1P03956 469 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 A1BGP04217 495 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 IVLP07476 585 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CABP4P57796 275 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 CCDC57Q2TAC2 916 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 KLHL10Q6JEL2 608 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 EFCC1Q9HA90 598 aa11.55□□□□□ -0.56
C2CD3-204ENST00000414160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
C2CD3-204ENST00000414160 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 MFAP3LO75121 409 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 RPS6KA5O75582 802 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 EIF3JO75822 258 aaKnown RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 ADD2P35612 726 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 MCAMP43121 646 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 FXR1P51114 621 aaKnown RBP eCLIP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 SPATA1Q5VX52 437 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 ACRBPQ8NEB7 543 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 SRPRBQ9Y5M8 271 aaKnown RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 C4AP0C0L4 1744 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CTAGE15A4D2H0 777 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 LRRIQ3A6PVS8 624 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 GYPCP04921 128 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CTAGE8P0CG41 777 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CASP1P29466 404 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 TUBB4BP68371 445 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 NR5A1Q13285 461 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CUL4BQ13620 913 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CTAGE6Q86UF2 777 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CTAGE4Q8IX94 777 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 NOA1Q8NC60 698 aaKnown RBP11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 CSRNP2Q9H175 543 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
C2CD3-204ENST00000414160 RNF225M0QZC1 329 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-204ENST00000414160 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 CDKAL1Q5VV42 579 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 LRRC31Q6UY01 552 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 ARFGEF2Q9Y6D5 1785 aa11.53□□□□□ -0.56
C2CD3-204ENST00000414160 A0A087X0B3 334 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 IFNAR1P17181 557 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 HSPA1LP34931 641 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 ARHGAP25P42331 645 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 AFMP43652 599 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.56
C2CD3-204ENST00000414160 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.56
C2CD3-204ENST00000414160 OXER1Q8TDS5 423 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 NAPGQ99747 312 aaPredicted RBP11.52□□□□□ -0.56
C2CD3-204ENST00000414160 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.52□□□□□ -0.56
C2CD3-204ENST00000414160 TTF2Q9UNY4 1162 aaKnown RBP11.52□□□□□ -0.56
C2CD3-204ENST00000414160 TACC3Q9Y6A5 838 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 SPEF2Q9C093 1822 aa11.52□□□□□ -0.56
C2CD3-204ENST00000414160 MEGF6O75095 1541 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 STK36Q9NRP7 1315 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 IFIT3O14879 490 aaKnown RBP11.52□□□□□ -0.57
C2CD3-204ENST00000414160 COBLO75128 1261 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 FECHP22830 423 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 ERVK-24P63145 666 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 CMTR1Q8N1G2 835 aaKnown RBP11.52□□□□□ -0.57
C2CD3-204ENST00000414160 FAM71BQ8TC56 605 aa11.52□□□□□ -0.57
C2CD3-204ENST00000414160 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
C2CD3-204ENST00000414160 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
C2CD3-204ENST00000414160 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms