RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
SCAMP4-204ENST00000414057 POTEFA5A3E0 1075 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 SLC4A8Q2Y0W8 1093 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 CCDC84Q86UT8 332 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 RAET1EQ8TD07 263 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 TRIM47Q96LD4 638 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 BCL11AQ9H165 835 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.85
SCAMP4-204ENST00000414057 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 OSBPP22059 807 aa20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 TTC6Q86TZ1 520 aa20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 WDR18Q9BV38 432 aa20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 ECHDC1Q9NTX5 307 aa20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
SCAMP4-204ENST00000414057 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-204ENST00000414057 SH3D19Q5HYK7 790 aa20.31■□□□□ 0.84
SCAMP4-204ENST00000414057 SAP30BPQ9UHR5 308 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-204ENST00000414057 MAGEB6P1A0A0J9YX57 407 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 CDC45O75419 566 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 CTGFP29279 349 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 HMGCS2P54868 508 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 SLC9C2Q5TAH2 1124 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 PRPF38BQ5VTL8 546 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 SH3TC2Q8TF17 1288 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 TMOD4Q9NZQ9 345 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 HTTP42858 3142 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 C19orf81C9J6K1 198 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 GCLCP48506 637 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 BACE1P56817 501 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 FAM110CQ1W6H9 321 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 TREML2Q5T2D2 321 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 EHD4Q9H223 541 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 SERPINB13Q9UIV8 391 aa20.3■□□□□ 0.84
SCAMP4-204ENST00000414057 USP17L10C9JJH3 530 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 GOLIM4O00461 696 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 SDSP20132 328 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 GRK4P32298 578 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 UPF2Q9HAU5 1272 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
SCAMP4-204ENST00000414057 TNPO2O14787 897 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 PDE6AP16499 860 aa20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 UBXN2AP68543 259 aa20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 COA7Q96BR5 231 aa20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 RIOK1Q9BRS2 568 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCAMP4-204ENST00000414057 GDF11O95390 407 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 ATP5JP18859 108 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 EN2P19622 333 aaPredicted RBP20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 PRKCZQ05513 592 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 MTMR2Q13614 643 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 ANKRD13CQ8N6S4 541 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 SLAIN1Q8ND83 568 aa20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
SCAMP4-204ENST00000414057 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.83
SCAMP4-204ENST00000414057 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 IRX3P78415 501 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 NKX2-3Q8TAU0 364 aa20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
SCAMP4-204ENST00000414057 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 TATDN1Q6P1N9 297 aa20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 ASCC2Q9H1I8 757 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 FOCADQ5VW36 1801 aa20.25■□□□□ 0.83
SCAMP4-204ENST00000414057 PTPRFP10586 1907 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 TRIM6-TRIM34B2RNG4 842 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 CERKLQ49MI3 558 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 TSHZ3Q63HK5 1081 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 TNRC18O15417 2968 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 MYO5AQ9Y4I1 1855 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 GH2P01242 217 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 FLT3LGP49771 235 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 IRF5Q13568 498 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 USP17L2Q6R6M4 530 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 PXYLP1Q8TE99 480 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 HAUS7Q99871 368 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
SCAMP4-204ENST00000414057 CENPFP49454 3210 aa20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 JAG1P78504 1218 aa20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 ABCB5Q2M3G0 1257 aa20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 GTF3C2Q8WUA4 911 aaPredicted RBP20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 FEZ1Q99689 392 aa20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 GABRQQ9UN88 632 aa20.23■□□□□ 0.83
SCAMP4-204ENST00000414057 ZSWIM8A7E2V4 1837 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 ATAD5Q96QE3 1844 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 SIPA1L1O43166 1804 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 TCRBV5S4A2TA0A5A2 114 aa20.22■□□□□ 0.83
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