RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NR1I2O75469 434 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 CLK1P49759 484 aaKnown RBP10.85□□□□□ -0.67
SNHG3-201ENST00000413987 GRAMD1BQ3KR37 738 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 KIAA1958Q8N8K9 716 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
SNHG3-201ENST00000413987 RABGAP1Q9Y3P9 1069 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 PPP2R3BQ9Y5P8 575 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 ICMTO60725 284 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 SOX11P35716 441 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 MCM2P49736 904 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 SEC13P55735 322 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 TCIRG1Q13488 830 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 ATP2B3Q16720 1220 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 BICDL1Q6ZP65 573 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 RNF214Q8ND24 703 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 ZNF700Q9H0M5 742 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 TAF1LQ8IZX4 1826 aa10.85□□□□□ -0.67
SNHG3-201ENST00000413987 RREB1Q92766 1687 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 CAMTA2O94983 1202 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
SNHG3-201ENST00000413987 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
SNHG3-201ENST00000413987 C16orf71Q8IYS4 520 aaPredicted RBP10.84□□□□□ -0.67
SNHG3-201ENST00000413987 OTUD7AQ8TE49 926 aaPredicted RBP10.84□□□□□ -0.67
SNHG3-201ENST00000413987 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 ZDHHC9Q9Y397 364 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 NUP98P52948 1817 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 CASP7P55210 303 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 ATP8B2P98198 1209 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 PKP1Q13835 747 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 ANKRD7Q92527 254 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 GOLGA1Q92805 767 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 ISCA1Q9BUE6 129 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 FANCLQ9NW38 375 aa10.84□□□□□ -0.67
SNHG3-201ENST00000413987 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
SNHG3-201ENST00000413987 REC8O95072 547 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 SRGNP10124 158 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 GABPB1Q06547 395 aaPredicted RBP10.83□□□□□ -0.68
SNHG3-201ENST00000413987 LRRC41Q15345 812 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
SNHG3-201ENST00000413987 QPCTQ16769 361 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 BRDTQ58F21 947 aaPredicted RBP10.83□□□□□ -0.68
SNHG3-201ENST00000413987 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 LMNTD2Q8IXW0 634 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 CCDC24Q8N4L8 307 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 E2F7Q96AV8 911 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 SIL1Q9H173 461 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 OGFRQ9NZT2 677 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 EVLQ9UI08 416 aaPredicted RBP10.83□□□□□ -0.68
SNHG3-201ENST00000413987 CNTNAP4Q9C0A0 1308 aa10.83□□□□□ -0.68
SNHG3-201ENST00000413987 PRMT3O60678 531 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 TOMM20Q15388 145 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 SYCP1Q15431 976 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 CRTC2Q53ET0 693 aaPredicted RBP10.82□□□□□ -0.68
SNHG3-201ENST00000413987 TSHZ3Q63HK5 1081 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 NLRP10Q86W26 655 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 RELL1Q8IUW5 271 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.82□□□□□ -0.685e-43■□□□□ 9.5
SNHG3-201ENST00000413987 DCTPP1Q9H773 170 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
SNHG3-201ENST00000413987 UTYO14607 1347 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
SNHG3-201ENST00000413987 ECM1Q16610 540 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 TTC22Q5TAA0 569 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 CKAP2LQ8IYA6 745 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 CCDC191Q8NCU4 936 aa10.82□□□□□ -0.68
SNHG3-201ENST00000413987 SRPK1Q96SB4 655 aaKnown RBP10.82□□□□□ -0.68
SNHG3-201ENST00000413987 PABPN1LA6NDY0 278 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 H7C1W4 665 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 SORBS3O60504 671 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 MAP2K1Q02750 393 aaPredicted RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 WASHC5Q12768 1159 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF827Q17R98 1081 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 Q3C1V9 767 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 ZNF831Q5JPB2 1677 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 SUSD4Q5VX71 490 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 ARMC3Q5W041 872 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 VPS37DQ86XT2 251 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 ZGPATQ8N5A5 531 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 IL1RAPL2Q9NP60 686 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 NIP7Q9Y221 180 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
SNHG3-201ENST00000413987 FAM196BA6NMK8 535 aa10.81□□□□□ -0.68
SNHG3-201ENST00000413987 CTIFO43310 598 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms