RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 HSF2BPO75031 334 aa19.35■□□□□ 0.69
PHRF1-202ENST00000413872 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
PHRF1-202ENST00000413872 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
PHRF1-202ENST00000413872 SERPINB2P05120 415 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 CC2D2BQ6DHV5 1058 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 MYL10Q9BUA6 226 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 MRPL11Q9Y3B7 192 aaKnown RBP19.34■□□□□ 0.69
PHRF1-202ENST00000413872 BTDP43251 543 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 USH1GQ495M9 461 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 ADCY10Q96PN6 1610 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 BMS1Q14692 1282 aaKnown RBP19.34■□□□□ 0.69
PHRF1-202ENST00000413872 LRRC24Q50LG9 513 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 FAM47AQ5JRC9 791 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 PHKBQ93100 1093 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 ATP6V0A2Q9Y487 856 aa19.34■□□□□ 0.69
PHRF1-202ENST00000413872 KDM3AQ9Y4C1 1321 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 RAPGEF1Q13905 1077 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 PRKG1Q13976 671 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 CERKLQ49MI3 558 aaPredicted RBP19.33■□□□□ 0.69
PHRF1-202ENST00000413872 HS1BP3Q53T59 392 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 DPH6Q7L8W6 267 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 CCDC117Q8IWD4 279 aaPredicted RBP19.33■□□□□ 0.69
PHRF1-202ENST00000413872 TRIM37O94972 964 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 CLSTN2Q9H4D0 955 aa19.33■□□□□ 0.69
PHRF1-202ENST00000413872 SPATA31A3Q5VYP0 1347 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 POLR2DO15514 142 aaKnown RBP19.33■□□□□ 0.68
PHRF1-202ENST00000413872 TRPC3Q13507 836 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 NOLC1Q14978 699 aaKnown RBP eCLIP19.33■□□□□ 0.68
PHRF1-202ENST00000413872 KIAA0825Q8IV33 1275 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 SULF1Q8IWU6 871 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 DDAH1O94760 285 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 GTF3C6Q969F1 213 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 IWS1Q96ST2 819 aa19.33■□□□□ 0.68
PHRF1-202ENST00000413872 SMCO2A6NFE2 343 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 RRP9O43818 475 aaKnown RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 EAPPQ56P03 285 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 CSGALNACT2Q8N6G5 542 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 DCPSQ96C86 337 aaKnown RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 SPC25Q9HBM1 224 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 ZNF335Q9H4Z2 1342 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 TUBBP07437 444 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 HSPD1P10809 573 aaKnown RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 NUP58Q9BVL2 599 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 PAK1Q13153 545 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 HERC4Q5GLZ8 1057 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 MCF2L2Q86YR7 1114 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 KIFC2Q96AC6 838 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 FAM107BQ9H098 131 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 STMN4Q9H169 189 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 MTUS1Q9ULD2 1270 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 SPECC1LQ69YQ0 1117 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 LEO1Q8WVC0 666 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-202ENST00000413872 NOX5Q96PH1 765 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 ZSWIM4Q9H7M6 989 aa19.32■□□□□ 0.68
PHRF1-202ENST00000413872 PLCB3Q01970 1234 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 OTUD6AQ7L8S5 288 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-202ENST00000413872 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 M0QZ92 97 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 CABP7Q86V35 215 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 PNMA1Q8ND90 353 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-202ENST00000413872 STAP2Q9UGK3 403 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 SWAP70Q9UH65 585 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
PHRF1-202ENST00000413872 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 HARSP12081 509 aaKnown RBP19.31■□□□□ 0.68
PHRF1-202ENST00000413872 GSTA5Q7RTV2 222 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 CCDC50Q8IVM0 306 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
PHRF1-202ENST00000413872 IQCGQ9H095 443 aaKnown RBP19.31■□□□□ 0.68
PHRF1-202ENST00000413872 ICA1Q05084 483 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 FANCBQ8NB91 859 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 PPP1R14CQ8TAE6 165 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 TRIM6Q9C030 488 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-202ENST00000413872 A0A0D9SFI3 127 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 ECM2O94769 699 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-202ENST00000413872 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 MED23Q9ULK4 1368 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 FERP16591 822 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 HACE1Q8IYU2 909 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
PHRF1-202ENST00000413872 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 GJC1P36383 396 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 TNKSO95271 1327 aa19.3■□□□□ 0.68
PHRF1-202ENST00000413872 GAS7O60861 476 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 ZNF202O95125 648 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 ARFGAP3Q9NP61 516 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 VPS54Q9P1Q0 977 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 TNFAIP3P21580 790 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 CDC42BPGQ6DT37 1551 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 ZMYM6O95789 1325 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms