RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 RGS3P49796 1198 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 GADL1Q6ZQY3 521 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 ATG9AQ7Z3C6 839 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 PRRT2Q7Z6L0 340 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 SCYL3Q8IZE3 742 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 LPIN2Q92539 896 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 POM121Q96HA1 1249 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 USP44Q9H0E7 712 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 USP40Q9NVE5 1235 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 MAST2Q6P0Q8 1798 aa10.24□□□□□ -0.77
UPF3AP1-201ENST00000413731 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 PHF20L1A8MW92 1017 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 ADCY3O60266 1144 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 BCAR3O75815 825 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 SEC24BO95487 1268 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 PTPRAP18433 802 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 PHKA1P46020 1223 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 FLT3LGP49771 235 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 ATP2B3Q16720 1220 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 SH3BP5LQ7L8J4 393 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 SIL1Q9H173 461 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 NR2E3Q9Y5X4 410 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 ZHX2Q9Y6X8 837 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 SALL1Q9NSC2 1324 aa10.23□□□□□ -0.77
UPF3AP1-201ENST00000413731 COL6A3P12111 3177 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 MYO5AQ9Y4I1 1855 aaKnown RBP10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 TNPO2O14787 897 aaKnown RBP10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 SGPL1O95470 568 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 ADORA1P30542 326 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 CLCN6P51797 869 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 DIS3LQ8TF46 1054 aaKnown RBP10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 PTCD2Q8WV60 388 aaKnown RBP10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 DEFB118Q96PH6 123 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 DDX4Q9NQI0 724 aaKnown RBP10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 PICK1Q9NRD5 415 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 AFG3L2Q9Y4W6 797 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 GAKO14976 1311 aa10.22□□□□□ -0.77
UPF3AP1-201ENST00000413731 DDTLA6NHG4 134 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 TRIM75PA6NK02 468 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 TRIM27P14373 513 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 IRF5Q13568 498 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 ATF7IPQ6VMQ6 1270 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 FASTKD5Q7L8L6 764 aaKnown RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 FTSJ3Q8IY81 847 aaKnown RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 ANKRD13CQ8N6S4 541 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 SMCR8Q8TEV9 937 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 IDI2Q9BXS1 227 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 PAK6Q9NQU5 681 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 SLC45A1Q9Y2W3 748 aa10.21□□□□□ -0.77
UPF3AP1-201ENST00000413731 FAM196BA6NMK8 535 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 ENTPD3O75355 529 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 BTDP43251 543 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 PICALMQ13492 652 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 RASGRF1Q13972 1273 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 TREML2Q5T2D2 321 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 CUL9Q8IWT3 2517 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 ZSCAN29Q8IWY8 852 aaPredicted RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 PXYLP1Q8TE99 480 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 GNL3LQ9NVN8 582 aaKnown RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 STAP2Q9UGK3 403 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 DENND2AQ9ULE3 1009 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 AGTPBP1Q9UPW5 1226 aa10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 LRRFIP2Q9Y608 721 aaKnown RBP10.2□□□□□ -0.78
UPF3AP1-201ENST00000413731 A0A1W2PPC1 479 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 DLL1O00548 723 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 CIAO1O76071 339 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 TFRCP02786 760 aaKnown RBP10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 OATP04181 439 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 FAM110CQ1W6H9 321 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 C7orf61Q8IZ16 206 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 SLC17A8Q8NDX2 589 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 PAWRQ96IZ0 340 aaKnown RBP10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
UPF3AP1-201ENST00000413731 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 CTNND1O60716 968 aaKnown RBP10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 CLK2P49760 499 aaKnown RBP10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 MAP3K10Q02779 954 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 TRIM32Q13049 653 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 CCDC102BQ68D86 513 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 COA7Q96BR5 231 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 ABCF2Q9UG63 623 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms