RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CYP2D6P10635 497 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 TATDN1Q6P1N9 297 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 ZNF280CQ8ND82 737 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 ATP8A2Q9NTI2 1148 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 SLC4A4Q9Y6R1 1079 aa22.69■■□□□ 1.22
TRIM56-202ENST00000412507 PDE1AP54750 535 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 OSBP2Q969R2 916 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 ERO1AQ96HE7 468 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 AS3MTQ9HBK9 375 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 STAP2Q9UGK3 403 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 ZBTB21Q9ULJ3 1066 aa22.68■■□□□ 1.22
TRIM56-202ENST00000412507 ZFYP08048 801 aaPredicted RBP22.67■■□□□ 1.22
TRIM56-202ENST00000412507 APPBP2Q92624 585 aa22.67■■□□□ 1.22
TRIM56-202ENST00000412507 FSD1Q9BTV5 496 aa22.67■■□□□ 1.22
TRIM56-202ENST00000412507 GINM1Q9NU53 330 aa22.67■■□□□ 1.22
TRIM56-202ENST00000412507 DOCK3Q8IZD9 2030 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 SHMT1P34896 483 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 HMGCS2P54868 508 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 CAP1Q01518 475 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 GABPAQ06546 454 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 CERKLQ49MI3 558 aaPredicted RBP22.66■■□□□ 1.22
TRIM56-202ENST00000412507 STRBPQ96SI9 672 aaKnown RBP22.66■■□□□ 1.22
TRIM56-202ENST00000412507 WDR18Q9BV38 432 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 TRIM17Q9Y577 477 aa22.66■■□□□ 1.22
TRIM56-202ENST00000412507 ADGRA2Q96PE1 1338 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 CCDC85CA6NKD9 419 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 GH2P01242 217 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 CYP2C8P10632 490 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 PKN2Q16513 984 aaKnown RBP22.65■■□□□ 1.22
TRIM56-202ENST00000412507 LRRFIP1Q32MZ4 808 aaKnown RBP22.65■■□□□ 1.22
TRIM56-202ENST00000412507 TREML2Q5T2D2 321 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 OTOP1Q7RTM1 612 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 PARK7Q99497 189 aaKnown RBP22.65■■□□□ 1.22
TRIM56-202ENST00000412507 CPA4Q9UI42 421 aa22.65■■□□□ 1.22
TRIM56-202ENST00000412507 CYP2D7A0A087X1C5 515 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 M0R2C6 588 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 NUCB1Q02818 461 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 C17orf99Q6UX52 265 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 CHD1LQ86WJ1 897 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 PROCA1Q8NCQ7 364 aaPredicted RBP22.64■■□□□ 1.21
TRIM56-202ENST00000412507 DYNLL2Q96FJ2 89 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 DDRGK1Q96HY6 314 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 AGTPBP1Q9UPW5 1226 aa22.64■■□□□ 1.21
TRIM56-202ENST00000412507 USP17L12C9JPN9 530 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 USP17L21D6R901 530 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 GPAA1O43292 621 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 MTMR2Q13614 643 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 ABCB5Q2M3G0 1257 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 SH3D19Q5HYK7 790 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 SLC44A5Q8NCS7 719 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 EFCC1Q9HA90 598 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 SLC45A1Q9Y2W3 748 aa22.63■■□□□ 1.21
TRIM56-202ENST00000412507 USP17L10C9JJH3 530 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 BACE1P56817 501 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 RAB3GAP1Q15042 981 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 C12orf60Q5U649 245 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 FBXO46Q6PJ61 603 aaPredicted RBP22.62■■□□□ 1.21
TRIM56-202ENST00000412507 AMOTL1Q8IY63 956 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 SEC62Q99442 399 aaKnown RBP22.62■■□□□ 1.21
TRIM56-202ENST00000412507 CABP5Q9NP86 173 aa22.62■■□□□ 1.21
TRIM56-202ENST00000412507 GSG1L2A8MUP6 293 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 ECM2O94769 699 aaPredicted RBP22.61■■□□□ 1.21
TRIM56-202ENST00000412507 ZMYM1Q5SVZ6 1142 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 CTR9Q6PD62 1173 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 EVI5LQ96CN4 794 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 HPS5Q9UPZ3 1129 aa22.61■■□□□ 1.21
TRIM56-202ENST00000412507 LACTBP83111 547 aaPredicted RBP22.6■■□□□ 1.21
TRIM56-202ENST00000412507 PLEKHM2Q8IWE5 1019 aa22.6■■□□□ 1.21
TRIM56-202ENST00000412507 SWAP70Q9UH65 585 aa22.6■■□□□ 1.21
TRIM56-202ENST00000412507 MYH4Q9Y623 1939 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 C19orf81C9J6K1 198 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 MPHOSPH10O00566 681 aaKnown RBP22.59■■□□□ 1.21
TRIM56-202ENST00000412507 BCRP11274 1271 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 KIF22Q14807 665 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 TMOD4Q9NZQ9 345 aa22.59■■□□□ 1.21
TRIM56-202ENST00000412507 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
TRIM56-202ENST00000412507 GREB1LQ9C091 1923 aaPredicted RBP22.59■■□□□ 1.21
TRIM56-202ENST00000412507 GNAT2P19087 354 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 CDK8P49336 464 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.212e-7■■■■■ 64.2
TRIM56-202ENST00000412507 SEPT2Q15019 361 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 ARHGEF6Q15052 776 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 GIMAP6Q6P9H5 292 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 SMCR8Q8TEV9 937 aaPredicted RBP22.58■■□□□ 1.21
TRIM56-202ENST00000412507 EPB41L4AQ9HCS5 686 aaPredicted RBP22.58■■□□□ 1.21
TRIM56-202ENST00000412507 PNMA3Q9UL41 463 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 PTPN22Q9Y2R2 807 aa22.58■■□□□ 1.21
TRIM56-202ENST00000412507 APPP05067 770 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 CTGFP29279 349 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 ZYXQ15942 572 aaKnown RBP22.57■■□□□ 1.2
TRIM56-202ENST00000412507 SBK1Q52WX2 424 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 C16orf86Q6ZW13 317 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 ACER1Q8TDN7 264 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 FEZ1Q99689 392 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 TAOK2Q9UL54 1235 aa22.57■■□□□ 1.2
TRIM56-202ENST00000412507 MINDY4BA8MYZ0 360 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms