RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 RANBP2P49792 3224 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 BACE1P56817 501 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 TRIM32Q13049 653 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 IRF5Q13568 498 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 U2AF1L4Q8WU68 220 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 P2RX7Q99572 595 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 RIOK1Q9BRS2 568 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 GJD2Q9UKL4 321 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 COLQQ9Y215 455 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 COG6Q9Y2V7 657 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 TRIOBPQ9H2D6 2365 aa20.15■□□□□ 0.82
SCAMP4-203ENST00000411971 APBB1O00213 710 aa20.14■□□□□ 0.81
SCAMP4-203ENST00000411971 SLFNL1Q499Z3 407 aa20.14■□□□□ 0.81
SCAMP4-203ENST00000411971 EMILIN3Q9NT22 766 aa20.14■□□□□ 0.81
SCAMP4-203ENST00000411971 SZT2Q5T011 3432 aa20.14■□□□□ 0.81
SCAMP4-203ENST00000411971 ASNSP08243 561 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 PXYLP1Q8TE99 480 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 TBC1D2Q9BYX2 928 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
SCAMP4-203ENST00000411971 BAZ2AQ9UIF9 1905 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 GH2P01242 217 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 CHGBP05060 677 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 PLCD1P51178 756 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 UBXN2AP68543 259 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 Q3C1V9 767 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 TATDN1Q6P1N9 297 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 AS3MTQ9HBK9 375 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 MORF4L1Q9UBU8 362 aa20.12■□□□□ 0.81
SCAMP4-203ENST00000411971 SGPL1O95470 568 aa20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 HOXA7P31268 230 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 GCLCP48506 637 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 PAK6Q9NQU5 681 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 RBPJLQ9UBG7 517 aa20.11■□□□□ 0.81
SCAMP4-203ENST00000411971 TCRBV5S4A2TA0A5A2 114 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 USP17L10C9JJH3 530 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 SMIM22K7EJ46 135 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 USP5P45974 858 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 FXR1P51114 621 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 ERC1Q8IUD2 1116 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 COA7Q96BR5 231 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 DEFB118Q96PH6 123 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 MYH7P12883 1935 aa20.1■□□□□ 0.81
SCAMP4-203ENST00000411971 IGSF3O75054 1194 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 HLA-DOAP06340 250 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 PDE6AP16499 860 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 GUCY1A2P33402 732 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 SHMT1P34896 483 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 HERVK_113P62684 666 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 ZYXQ15942 572 aaKnown RBP20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 NKX2-3Q8TAU0 364 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 ACER1Q8TDN7 264 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 PORCNQ9H237 461 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 RLFQ13129 1914 aa20.09■□□□□ 0.81
SCAMP4-203ENST00000411971 MYH8P13535 1937 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 C19orf81C9J6K1 198 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 FARP2O94887 1054 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 IRX3P78415 501 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 MAP3K12Q12852 859 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 DIS3LQ8TF46 1054 aaKnown RBP20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 TRIB2Q92519 343 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 EHD4Q9H223 541 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 TMOD4Q9NZQ9 345 aa20.08■□□□□ 0.81
SCAMP4-203ENST00000411971 ZNF532Q9HCE3 1301 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 GOLIM4O00461 696 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 CNMDO75829 334 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 CYP2D6P10635 497 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 GABPAQ06546 454 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 RPAP2Q8IXW5 612 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 LCORLQ8N3X6 602 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 DPF3Q92784 378 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 KIF1BPQ96EK5 621 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 DNAJC2Q99543 621 aaKnown RBP20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 CRISPLD2Q9H0B8 497 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 SERPINB13Q9UIV8 391 aa20.07■□□□□ 0.8
SCAMP4-203ENST00000411971 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-203ENST00000411971 SLC9C2Q5TAH2 1124 aa20.06■□□□□ 0.8
SCAMP4-203ENST00000411971 SDR42E1Q8WUS8 393 aa20.06■□□□□ 0.8
SCAMP4-203ENST00000411971 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.06■□□□□ 0.85e-6■■■□□ 16.8
SCAMP4-203ENST00000411971 GINM1Q9NU53 330 aa20.06■□□□□ 0.8
SCAMP4-203ENST00000411971 MAGEB6P1A0A0J9YX57 407 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 PRKAB2O43741 272 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 CYP2B6P20813 491 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 CHRDL2Q6WN34 429 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 SLC44A5Q8NCS7 719 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 USP6NLQ92738 828 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 C12orf42Q96LP6 360 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 PAGR1Q9BTK6 254 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 PCDH10Q9P2E7 1040 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
SCAMP4-203ENST00000411971 FRMPD3Q5JV73 1810 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 TFRCP02786 760 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms