RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 RASA1P20936 1047 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 RPS12P25398 132 aaKnown RBP13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 TFAP4Q01664 338 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 NTRK3Q16288 839 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 RTN1Q16799 776 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 STK11IPQ8N1F8 1099 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 FANCBQ8NB91 859 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 ZKSCAN3Q9BRR0 538 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 BCS1LQ9Y276 419 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 COL4A5P29400 1685 aa13.58□□□□□ -0.24
CLUHP3-202ENST00000411844 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 CDC27P30260 824 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 NOVP48745 357 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 FKBP1CQ5VVH2 108 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 TRIM22Q8IYM9 498 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 DDX4Q9NQI0 724 aaKnown RBP13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 SERPINB13Q9UIV8 391 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 ATRNL1Q5VV63 1379 aa13.57□□□□□ -0.24
CLUHP3-202ENST00000411844 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 RAD17O75943 681 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 KIF5BP33176 963 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 CXCL9Q07325 125 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 SSRP1Q08945 709 aaKnown RBP13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 TROAPQ12815 778 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 PICALMQ13492 652 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 FAM47AQ5JRC9 791 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 CDC37L1Q7L3B6 337 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 CCDC17Q96LX7 622 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 KAT14Q9H8E8 782 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
CLUHP3-202ENST00000411844 ECM29Q5VYK3 1845 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 TRAK2O60296 914 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 GNAQP50148 359 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 EVX2Q03828 476 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 RESTQ13127 1097 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 DLGAP5Q15398 846 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
CLUHP3-202ENST00000411844 DEXIO95424 95 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 MBD3O95983 291 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 KRT85P78386 507 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 DPF2Q92785 391 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 ZBED3Q96IU2 234 aaPredicted RBP13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 MYH1P12882 1939 aa13.54□□□□□ -0.24
CLUHP3-202ENST00000411844 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 FZD9O00144 591 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 PRPF3O43395 683 aaKnown RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 RXRAP19793 462 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 ZNF280AP59817 542 aaPredicted RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 NFIAQ12857 509 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 BRAPQ7Z569 592 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 RAB11FIP4Q86YS3 637 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
CLUHP3-202ENST00000411844 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms