RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SPEF2Q9C093 1822 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
LINC00396-201ENST00000411690 HMGCRP04035 888 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 RIPK4P57078 832 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 CHRNDQ07001 517 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 MOGSQ13724 837 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 DCAF15Q66K64 600 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 THAP11Q96EK4 314 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 C1QTNF1Q9BXJ1 281 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 TTYH1Q9H313 450 aaPredicted RBP8.17□□□□□ -1.1
LINC00396-201ENST00000411690 OGDHLQ9ULD0 1010 aa8.17□□□□□ -1.1
LINC00396-201ENST00000411690 SNAP23O00161 211 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 TAF5LO75529 589 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 HOXB7P09629 217 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 SMPD1P17405 629 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 INPP5BP32019 993 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 CRKP46108 304 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 LRRC26Q2I0M4 334 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 C15orf52Q6ZUT6 534 aaKnown RBP8.16□□□□□ -1.1
LINC00396-201ENST00000411690 MIGA2Q7L4E1 593 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
LINC00396-201ENST00000411690 ARAP2Q8WZ64 1704 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 SNX27Q96L92 541 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 METTL22Q9BUU2 404 aaPredicted RBP8.16□□□□□ -1.1
LINC00396-201ENST00000411690 ZNF341Q9BYN7 854 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 PHAXQ9H814 394 aaKnown RBP8.16□□□□□ -1.1
LINC00396-201ENST00000411690 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
LINC00396-201ENST00000411690 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
LINC00396-201ENST00000411690 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 CHL1O00533 1208 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 CXCL11O14625 94 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 COL6A1P12109 1028 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 ITGA6P23229 1130 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 CACNB3P54284 484 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 TRIM32Q13049 653 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 SHHQ15465 462 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 FASTKD5Q7L8L6 764 aaKnown RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 USP38Q8NB14 1042 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 SMCR8Q8TEV9 937 aaPredicted RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 UHRF1Q96T88 793 aaPredicted RBP8.15□□□□□ -1.1
LINC00396-201ENST00000411690 PRKAG2Q9UGJ0 569 aa8.15□□□□□ -1.1
LINC00396-201ENST00000411690 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
LINC00396-201ENST00000411690 MORN1Q5T089 497 aa8.14□□□□□ -1.11
LINC00396-201ENST00000411690 FAM83AQ86UY5 434 aa8.14□□□□□ -1.11
LINC00396-201ENST00000411690 ASB2Q96Q27 587 aa8.14□□□□□ -1.11
LINC00396-201ENST00000411690 TMOD2Q9NZR1 351 aa8.14□□□□□ -1.11
LINC00396-201ENST00000411690 TTC28Q96AY4 2481 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
LINC00396-201ENST00000411690 C9orf50Q5SZB4 431 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 DUSP27Q5VZP5 1158 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
LINC00396-201ENST00000411690 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 ZNF112Q9UJU3 913 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 SLC45A1Q9Y2W3 748 aa8.13□□□□□ -1.11
LINC00396-201ENST00000411690 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
LINC00396-201ENST00000411690 J3QL48 77 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 MRPS5P82675 430 aaKnown RBP8.12□□□□□ -1.11
LINC00396-201ENST00000411690 HDLBPQ00341 1268 aaKnown RBP8.12□□□□□ -1.11
LINC00396-201ENST00000411690 FUT2Q10981 343 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 FKBP1CQ5VVH2 108 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
LINC00396-201ENST00000411690 TDRD7Q8NHU6 1098 aaKnown RBP8.12□□□□□ -1.11
LINC00396-201ENST00000411690 PPM1EQ8WY54 764 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 THEGQ9P2T0 379 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 GJD2Q9UKL4 321 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 MAP3K2Q9Y2U5 619 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 ZHX2Q9Y6X8 837 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 EYSQ5T1H1 3165 aa8.12□□□□□ -1.11
LINC00396-201ENST00000411690 MYH3P11055 1940 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 ANKRD18BA2A2Z9 1011 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
LINC00396-201ENST00000411690 TMPOP42166 694 aaKnown RBP8.11□□□□□ -1.11
LINC00396-201ENST00000411690 FAM110CQ1W6H9 321 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 NOL9Q5SY16 702 aaKnown RBP8.11□□□□□ -1.11
LINC00396-201ENST00000411690 UBE3BQ7Z3V4 1068 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 TRIB2Q92519 343 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 TEKT1Q969V4 418 aa8.11□□□□□ -1.11
LINC00396-201ENST00000411690 SENP6Q9GZR1 1112 aaPredicted RBP8.11□□□□□ -1.11
LINC00396-201ENST00000411690 RPAP1Q9BWH6 1393 aaPredicted RBP8.1□□□□□ -1.11
LINC00396-201ENST00000411690 H7C1W4 665 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 WNT7AO00755 349 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 PLIN1O60240 522 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 CSF1RP07333 972 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 CYP2B6P20813 491 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 NEXNQ0ZGT2 675 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 PDE3AQ14432 1141 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 NEUROD2Q15784 382 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 CWF19L2Q2TBE0 894 aaKnown RBP8.1□□□□□ -1.11
LINC00396-201ENST00000411690 MAP3K21Q5TCX8 1036 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
LINC00396-201ENST00000411690 LRFN3Q9BTN0 628 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms