RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 CTR9Q6PD62 1173 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 FMR1NBQ8N0W7 255 aaPredicted RBP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 SLC26A6Q9BXS9 759 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 ZNF287Q9HBT7 754 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 ANO10Q9NW15 660 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
LIMS1-205ENST00000410093 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
LIMS1-205ENST00000410093 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 MMP1P03956 469 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 PLCG2P16885 1265 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 FOSBP53539 338 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 CAMK4Q16566 473 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 TBC1D22AQ8WUA7 517 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 DCP1AQ9NPI6 582 aaPredicted RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 H0YIN7 160 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 RANBP6O60518 1105 aaKnown RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 POLR3DP05423 398 aaPredicted RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 CHRNA5P30532 468 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
LIMS1-205ENST00000410093 ZNF384Q8TF68 577 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 TACC3Q9Y6A5 838 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
LIMS1-205ENST00000410093 USP17L12C9JPN9 530 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 USP17L21D6R901 530 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
LIMS1-205ENST00000410093 CUTAO60888 179 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 BMP15O95972 392 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 IL1R1P14778 569 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 PDE6BP35913 854 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 ZNF165P49910 485 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 DYNLL1P63167 89 aaKnown RBP15.67■□□□□ 0.1
LIMS1-205ENST00000410093 ZRSR1Q15695 479 aaKnown RBP15.67■□□□□ 0.1
LIMS1-205ENST00000410093 TPRNQ4KMQ1 711 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 ENAHQ8N8S7 591 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-205ENST00000410093 PHKBQ93100 1093 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 GGA1Q9UJY5 639 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 CLIC4Q9Y696 253 aa15.67■□□□□ 0.1
LIMS1-205ENST00000410093 KCNA3P22001 575 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
LIMS1-205ENST00000410093 OTUD7BQ6GQQ9 843 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 ANKS1AQ92625 1134 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 BPIFA3Q9BQP9 254 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 SDF4Q9BRK5 362 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 CBX8Q9HC52 389 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 AATFQ9NY61 560 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIMS1-205ENST00000410093 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
LIMS1-205ENST00000410093 NRXN2Q9P2S2 1712 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 NAV1Q8NEY1 1877 aa15.66■□□□□ 0.1
LIMS1-205ENST00000410093 KIF28PB7ZC32 967 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 GOLGA6L19H0YKK7 550 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 KLRK1P26718 216 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 KIF5BP33176 963 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-205ENST00000410093 RAB11FIP4Q86YS3 637 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 NKX2-3Q8TAU0 364 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-205ENST00000410093 GOLPH3LQ9H4A5 285 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 BRMS1Q9HCU9 246 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 TCP11L1Q9NUJ3 509 aa15.65■□□□□ 0.1
LIMS1-205ENST00000410093 RXRAP19793 462 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 PRDX5P30044 214 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 CDC25BP30305 580 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-205ENST00000410093 SARM1Q6SZW1 724 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 DGKHQ86XP1 1220 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 CCDC144CPQ8IYA2 1237 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 CEP57L1Q8IYX8 460 aa15.64■□□□□ 0.09
LIMS1-205ENST00000410093 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
LIMS1-205ENST00000410093 CTCFLQ8NI51 663 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-205ENST00000410093 FTOQ9C0B1 505 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIMS1-205ENST00000410093 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
LIMS1-205ENST00000410093 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-205ENST00000410093 GNAQP50148 359 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 TERF1P54274 439 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 TROAPQ12815 778 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 DHX8Q14562 1220 aaKnown RBP15.63■□□□□ 0.09
LIMS1-205ENST00000410093 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 PTPAQ15257 358 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 C12orf60Q5U649 245 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 SP8Q8IXZ3 490 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms