RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 IFIT1BQ5T764 474 aaKnown RBP13.14□□□□□ -0.31
RAB1C-201ENST00000409159 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 TATDN1Q6P1N9 297 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
RAB1C-201ENST00000409159 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
RAB1C-201ENST00000409159 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 DYNLL2Q96FJ2 89 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 PRDM1O75626 825 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAB1C-201ENST00000409159 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 SCRN1Q12765 414 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
RAB1C-201ENST00000409159 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
RAB1C-201ENST00000409159 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
RAB1C-201ENST00000409159 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 SMIM22K7EJ46 135 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 SHMT1P34896 483 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 SH3BP5LQ7L8J4 393 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 ZNF654Q8IZM8 581 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
RAB1C-201ENST00000409159 PITPNM2Q9BZ72 1349 aa13.12□□□□□ -0.31
RAB1C-201ENST00000409159 CNTNAP1P78357 1384 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 CPLX1O14810 134 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
RAB1C-201ENST00000409159 GNAQP50148 359 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 TCP10Q12799 353 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 TROAPQ12815 778 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
RAB1C-201ENST00000409159 CSRNP1Q96S65 589 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 PGAP2Q9UHJ9 254 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
RAB1C-201ENST00000409159 STK36Q9NRP7 1315 aa13.11□□□□□ -0.31
RAB1C-201ENST00000409159 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 LAMB1P07942 1786 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 GOLGA8AA7E2F4 631 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 BRD1O95696 1058 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
RAB1C-201ENST00000409159 IFNAR1P17181 557 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 GJB2P29033 226 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 KIF5BP33176 963 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 CACNB3P54284 484 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 EVX2Q03828 476 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 STK3Q13188 491 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 RTN1Q16799 776 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 WASF1Q92558 559 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 ADARB2Q9NS39 739 aaKnown RBP13.1□□□□□ -0.31
RAB1C-201ENST00000409159 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
RAB1C-201ENST00000409159 FOCADQ5VW36 1801 aa13.1□□□□□ -0.31
RAB1C-201ENST00000409159 TTLL1O95922 423 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 RASA3Q14644 834 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
RAB1C-201ENST00000409159 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
RAB1C-201ENST00000409159 STK11IPQ8N1F8 1099 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
RAB1C-201ENST00000409159 MKL1Q969V6 931 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
RAB1C-201ENST00000409159 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms