RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PDHXO00330 501 aa21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 GPAA1O43292 621 aa21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 EVX2Q03828 476 aa21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 CERKLQ49MI3 558 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 GADL1Q6ZQY3 521 aa21.54■■□□□ 1.04
PDLIM2-206ENST00000409141 M0R2C6 588 aa21.53■■□□□ 1.04
PDLIM2-206ENST00000409141 DGKZQ13574 1117 aa21.53■■□□□ 1.04
PDLIM2-206ENST00000409141 SHROOM1Q2M3G4 852 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-206ENST00000409141 ZBTB21Q9ULJ3 1066 aa21.53■■□□□ 1.04
PDLIM2-206ENST00000409141 TRIM6-TRIM34B2RNG4 842 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 GH2P01242 217 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 GNAT2P19087 354 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 SHMT1P34896 483 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 GABPAQ06546 454 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 ZMYM1Q5SVZ6 1142 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 GPAT2Q6NUI2 795 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 SEC62Q99442 399 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 OSBPL3Q9H4L5 887 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 NAV1Q8NEY1 1877 aa21.52■■□□□ 1.04
PDLIM2-206ENST00000409141 CYP2D7A0A087X1C5 515 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 GSG1L2A8MUP6 293 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 C12orf60Q5U649 245 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 CTR9Q6PD62 1173 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 CTU1Q7Z7A3 348 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 RILPL2Q969X0 211 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 WDR18Q9BV38 432 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 CABP5Q9NP86 173 aa21.52■■□□□ 1.03
PDLIM2-206ENST00000409141 TLR2O60603 784 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 APPP05067 770 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 GIMAP6Q6P9H5 292 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 DYNLL2Q96FJ2 89 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 MCOLN1Q9GZU1 580 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 SWAP70Q9UH65 585 aa21.51■■□□□ 1.03
PDLIM2-206ENST00000409141 HMGCS2P54868 508 aa21.5■■□□□ 1.03
PDLIM2-206ENST00000409141 SP3Q02447 781 aa21.5■■□□□ 1.03
PDLIM2-206ENST00000409141 ARPP21Q9UBL0 812 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-206ENST00000409141 TAOK2Q9UL54 1235 aa21.5■■□□□ 1.03
PDLIM2-206ENST00000409141 DDX60LQ5H9U9 1706 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 PATL2C9JE40 543 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 RAB3GAP1Q15042 981 aa21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 PROCA1Q8NCQ7 364 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 SLC44A5Q8NCS7 719 aa21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 ATAD5Q96QE3 1844 aa21.49■■□□□ 1.03
PDLIM2-206ENST00000409141 SMIM22K7EJ46 135 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 MPHOSPH10O00566 681 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 TDO2P48775 406 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 BACE1P56817 501 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 MTMR2Q13614 643 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 TICAM2Q86XR7 235 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 ERO1AQ96HE7 468 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 PARK7Q99497 189 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 AGTPBP1Q9UPW5 1226 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
PDLIM2-206ENST00000409141 C19orf81C9J6K1 198 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 USP17L10C9JJH3 530 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 CYP2C8P10632 490 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 CDK8P49336 464 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 SBK1Q52WX2 424 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 IFNL3Q8IZI9 196 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 NACAP1Q9BZK3 213 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 TMOD4Q9NZQ9 345 aa21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 BAZ2AQ9UIF9 1905 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-206ENST00000409141 MINDY4BA8MYZ0 360 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 PDE4AP27815 886 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 TREML2Q5T2D2 321 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 CCDC129Q6ZRS4 1044 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 C16orf86Q6ZW13 317 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 CD99L2Q8TCZ2 262 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 ABHD8Q96I13 439 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 EPB41L4AQ9HCS5 686 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 HELLSQ9NRZ9 838 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
PDLIM2-206ENST00000409141 SEPT2Q15019 361 aa21.45■■□□□ 1.03
PDLIM2-206ENST00000409141 C17orf99Q6UX52 265 aa21.45■■□□□ 1.03
PDLIM2-206ENST00000409141 PABPC4Q13310 644 aaKnown RBP eCLIP21.45■■□□□ 1.02
PDLIM2-206ENST00000409141 PKN2Q16513 984 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-206ENST00000409141 FAM227BQ96M60 508 aa21.45■■□□□ 1.02
PDLIM2-206ENST00000409141 GUCY1A2P33402 732 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 MCMDC2Q4G0Z9 681 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 STK11IPQ8N1F8 1099 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 CCDC17Q96LX7 622 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 FEZ1Q99689 392 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 PNMA3Q9UL41 463 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 TRIM17Q9Y577 477 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 PTPRFP10586 1907 aa21.44■■□□□ 1.02
PDLIM2-206ENST00000409141 CAPN15O75808 1086 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 AKR1B1P15121 316 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 SDSP20132 328 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 NMIQ13287 307 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 KIF22Q14807 665 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 ARHGEF6Q15052 776 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 SMCR8Q8TEV9 937 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 NAPBQ9H115 298 aa21.43■■□□□ 1.02
PDLIM2-206ENST00000409141 ADGRA2Q96PE1 1338 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms