RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
RPAIN-204ENST00000405578 PPP4CP60510 307 aa12.67□□□□□ -0.38
RPAIN-204ENST00000405578 PPIL2Q13356 520 aa12.67□□□□□ -0.38
RPAIN-204ENST00000405578 FKBP1CQ5VVH2 108 aa12.67□□□□□ -0.38
RPAIN-204ENST00000405578 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-204ENST00000405578 AATFQ9NY61 560 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPAIN-204ENST00000405578 DDX60LQ5H9U9 1706 aaKnown RBP12.67□□□□□ -0.38
RPAIN-204ENST00000405578 SGPL1O95470 568 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 APPBP2Q92624 585 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 PTPRFP10586 1907 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
RPAIN-204ENST00000405578 PDHXO00330 501 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 SDSP20132 328 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 CACNB3P54284 484 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
RPAIN-204ENST00000405578 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 CASC1Q6TDU7 716 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 ANKRD23Q86SG2 305 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 GDF15Q99988 308 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 CRNKL1Q9BZJ0 848 aaKnown RBP12.65□□□□□ -0.38
RPAIN-204ENST00000405578 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 ZMYND8Q9ULU4 1186 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-204ENST00000405578 GABRQQ9UN88 632 aa12.65□□□□□ -0.38
RPAIN-204ENST00000405578 TCRBV5S4A2TA0A5A2 114 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 TFRCP02786 760 aaKnown RBP12.64□□□□□ -0.39
RPAIN-204ENST00000405578 INHAP05111 366 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
RPAIN-204ENST00000405578 ELNP15502 786 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 GNAT2P19087 354 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 BMP8BP34820 402 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 USP5P45974 858 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 FCGRTP55899 365 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 ADGRA1Q86SQ6 560 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 FAM83AQ86UY5 434 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
RPAIN-204ENST00000405578 ADCY3O60266 1144 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 ENTPD3O75355 529 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
RPAIN-204ENST00000405578 MBD4O95243 580 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 PPATQ06203 517 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 ZMYM1Q5SVZ6 1142 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPAIN-204ENST00000405578 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-204ENST00000405578 DIS3LQ8TF46 1054 aaKnown RBP12.63□□□□□ -0.39
RPAIN-204ENST00000405578 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
RPAIN-204ENST00000405578 IDI2Q9BXS1 227 aa12.63□□□□□ -0.39
RPAIN-204ENST00000405578 DOCK2Q92608 1830 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 BCRP11274 1271 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 INPP5BP32019 993 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 RHBDL3P58872 404 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
RPAIN-204ENST00000405578 PICALMQ13492 652 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 MCMDC2Q4G0Z9 681 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-204ENST00000405578 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 FAM151AQ8WW52 585 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 OSBP2Q969R2 916 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
RPAIN-204ENST00000405578 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
RPAIN-204ENST00000405578 NACAP1Q9BZK3 213 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
RPAIN-204ENST00000405578 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
RPAIN-204ENST00000405578 RPAP1Q9BWH6 1393 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-204ENST00000405578 GPAA1O43292 621 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 APPP05067 770 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 TCP10Q12799 353 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 LRIT3Q3SXY7 679 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 CWC27Q6UX04 472 aaKnown RBP12.61□□□□□ -0.39
RPAIN-204ENST00000405578 NECAB2Q7Z6G3 386 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 ZNF341Q9BYN7 854 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
RPAIN-204ENST00000405578 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
RPAIN-204ENST00000405578 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 CYP2C8P10632 490 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 SYN1P17600 705 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-204ENST00000405578 FLT3LGP49771 235 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 NFIAQ12857 509 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms