RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
SMS-202ENST00000404933 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 DDAH1O94760 285 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 CEBPZQ03701 1054 aaKnown RBP13.72□□□□□ -0.21
SMS-202ENST00000404933 KRT40Q6A162 431 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 CRACR2BQ8N4Y2 399 aaPredicted RBP13.72□□□□□ -0.21
SMS-202ENST00000404933 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 PGBD1Q96JS3 809 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 RTEL1Q9NZ71 1219 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 CCDC39Q9UFE4 941 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 MYH1P12882 1939 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
SMS-202ENST00000404933 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
SMS-202ENST00000404933 DEXIO95424 95 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
SMS-202ENST00000404933 BAG6P46379 1132 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 EVX2Q03828 476 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 NBPF11Q86T75 865 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 FBXO41Q8TF61 875 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
SMS-202ENST00000404933 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
SMS-202ENST00000404933 LIG1P18858 919 aa13.71□□□□□ -0.22
SMS-202ENST00000404933 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.22
SMS-202ENST00000404933 DOK7Q18PE1 504 aa13.71□□□□□ -0.22
SMS-202ENST00000404933 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.22
SMS-202ENST00000404933 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.22
SMS-202ENST00000404933 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.22
SMS-202ENST00000404933 YEATS4O95619 227 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 RHBDL3P58872 404 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
SMS-202ENST00000404933 TROAPQ12815 778 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 DAGLAQ9Y4D2 1042 aa13.7□□□□□ -0.22
SMS-202ENST00000404933 FLT1P17948 1338 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 TFAP4Q01664 338 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 SAFBQ15424 915 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMS-202ENST00000404933 SLC4A8Q2Y0W8 1093 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
SMS-202ENST00000404933 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
SMS-202ENST00000404933 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 FTOQ9C0B1 505 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMS-202ENST00000404933 DACT1Q9NYF0 836 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
SMS-202ENST00000404933 NMT2O60551 498 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 U2AF2P26368 475 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMS-202ENST00000404933 PLCD1P51178 756 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 STK38Q15208 465 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 CERS5Q8N5B7 392 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 LINC00301Q8NCQ3 95 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 ANKS1AQ92625 1134 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 TCP11L1Q9NUJ3 509 aa13.69□□□□□ -0.22
SMS-202ENST00000404933 TTF2Q9UNY4 1162 aaKnown RBP13.69□□□□□ -0.22
SMS-202ENST00000404933 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
SMS-202ENST00000404933 MMP1P03956 469 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 XBP1P17861 261 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 CHRNA5P30532 468 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 ME1P48163 572 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 ANO1Q5XXA6 986 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
SMS-202ENST00000404933 KIF5BP33176 963 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
SMS-202ENST00000404933 FUT2Q10981 343 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 SF3A1Q15459 793 aaKnown RBP13.67□□□□□ -0.22
SMS-202ENST00000404933 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 RCSD1Q6JBY9 416 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
SMS-202ENST00000404933 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
SMS-202ENST00000404933 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMS-202ENST00000404933 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 CLIC4Q9Y696 253 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 F8W031 263 aaPredicted RBP13.67□□□□□ -0.22
SMS-202ENST00000404933 UBE2Q2LH0YL09 131 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
SMS-202ENST00000404933 SPTLC2O15270 562 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms