RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SHROOM1Q2M3G4 852 aaPredicted RBP39.38■■■■□ 3.9
CSNK1E-204ENST00000403904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP39.38■■■■□ 3.9
CSNK1E-204ENST00000403904 CNNM2Q9H8M5 875 aa39.38■■■■□ 3.9
CSNK1E-204ENST00000403904 B4E1Z4 1266 aa39.38■■■■□ 3.89
CSNK1E-204ENST00000403904 FAM47AQ5JRC9 791 aa39.38■■■■□ 3.89
CSNK1E-204ENST00000403904 ARMC9Q7Z3E5 817 aa39.38■■■■□ 3.89
CSNK1E-204ENST00000403904 ZKSCAN4Q969J2 545 aaPredicted RBP39.38■■■■□ 3.89
CSNK1E-204ENST00000403904 AKR1B1P15121 316 aa39.37■■■■□ 3.89
CSNK1E-204ENST00000403904 KRT32Q14532 448 aa39.37■■■■□ 3.89
CSNK1E-204ENST00000403904 KRT23Q9C075 422 aa39.37■■■■□ 3.89
CSNK1E-204ENST00000403904 PAPPA2Q9BXP8 1791 aa39.37■■■■□ 3.89
CSNK1E-204ENST00000403904 CAP2P40123 477 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 JAG1P78504 1218 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 MAP3K11Q16584 847 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 C2orf69Q8N8R5 385 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 NCOA7Q8NI08 942 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 OTOFQ9HC10 1997 aa39.36■■■■□ 3.89
CSNK1E-204ENST00000403904 UBE2Q2LH0YL09 131 aa39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 MPHOSPH10O00566 681 aaKnown RBP39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 KDM4AO75164 1064 aa39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 TFAP4Q01664 338 aa39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 RALYLQ86SE5 291 aaKnown RBP39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 CCDC17Q96LX7 622 aa39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 ATAD5Q96QE3 1844 aa39.35■■■■□ 3.89
CSNK1E-204ENST00000403904 CTNND1O60716 968 aaKnown RBP39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 FKBP1BP68106 108 aa39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 MAP3K9P80192 1104 aa39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 COL9A3Q14050 684 aaPredicted RBP39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 ABCB5Q2M3G0 1257 aa39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 ESR2Q92731 530 aa39.34■■■■□ 3.89
CSNK1E-204ENST00000403904 TSPY2A6NKD2 308 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 RBM25P49756 843 aaKnown RBP39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 ANAPC15P60006 121 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 PPP1R3FQ6ZSY5 799 aaPredicted RBP39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 JAKMIP1Q96N16 626 aaKnown RBP39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 GH2P01242 217 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 TSPY3P0CV98 308 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 TSPY8P0CW00 308 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 TBC1D32Q96NH3 1257 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 NEK1Q96PY6 1258 aa39.33■■■■□ 3.89
CSNK1E-204ENST00000403904 ZBTB4Q9P1Z0 1013 aaPredicted RBP39.32■■■■□ 3.88
CSNK1E-204ENST00000403904 ZSWIM5Q9P217 1185 aa39.32■■■■□ 3.88
CSNK1E-204ENST00000403904 FRMD4AQ9P2Q2 1039 aaPredicted RBP39.31■■■■□ 3.88
CSNK1E-204ENST00000403904 DOCK1Q14185 1865 aa39.31■■■■□ 3.88
CSNK1E-204ENST00000403904 VGLL4Q14135 290 aa39.3■■■■□ 3.88
CSNK1E-204ENST00000403904 MB21D2Q8IYB1 491 aaPredicted RBP39.3■■■■□ 3.88
CSNK1E-204ENST00000403904 ANKRD13AQ8IZ07 590 aa39.3■■■■□ 3.88
CSNK1E-204ENST00000403904 CABP5Q9NP86 173 aa39.3■■■■□ 3.88
CSNK1E-204ENST00000403904 ZBTB21Q9ULJ3 1066 aa39.3■■■■□ 3.88
CSNK1E-204ENST00000403904 LDLRAD1Q5T700 205 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 CYB5R4Q7L1T6 521 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 SCYL3Q8IZE3 742 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 GNL3Q9BVP2 549 aaKnown RBP eCLIP39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 CSADQ9Y600 493 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 NEDD1Q8NHV4 660 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 CLMNQ96JQ2 1002 aa39.29■■■■□ 3.88
CSNK1E-204ENST00000403904 CHST3Q7LGC8 479 aa39.28■■■■□ 3.88
CSNK1E-204ENST00000403904 GREB1LQ9C091 1923 aaPredicted RBP39.28■■■■□ 3.88
CSNK1E-204ENST00000403904 ASNSP08243 561 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 CPA1P15085 419 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 CASTP20810 708 aaKnown RBP39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 PSMA5P28066 241 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 GUCY1A2P33402 732 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 SEPT2Q15019 361 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 RAB3GAP1Q15042 981 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 NOL9Q5SY16 702 aaKnown RBP39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 TMEM179Q6ZVK1 233 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 ZKSCAN3Q9BRR0 538 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 SNCAIPQ9Y6H5 919 aa39.27■■■■□ 3.88
CSNK1E-204ENST00000403904 NMT2O60551 498 aa39.26■■■■□ 3.88
CSNK1E-204ENST00000403904 NT5C2P49902 561 aa39.26■■■■□ 3.88
CSNK1E-204ENST00000403904 IL17RAQ96F46 866 aa39.26■■■■□ 3.88
CSNK1E-204ENST00000403904 TMEM88BA6NKF7 163 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 CLEC10AQ8IUN9 316 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 PICK1Q9NRD5 415 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 IL17RBQ9NRM6 502 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 PLIN4Q96Q06 1357 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 ANTXR2P58335 489 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 CCDC84Q86UT8 332 aaPredicted RBP39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 KIF2CQ99661 725 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 ELP3Q9H9T3 547 aa39.25■■■■□ 3.87
CSNK1E-204ENST00000403904 MCM5P33992 734 aa39.24■■■■□ 3.87
CSNK1E-204ENST00000403904 HUNKP57058 714 aa39.24■■■■□ 3.87
CSNK1E-204ENST00000403904 BLOC1S2Q6QNY1 142 aa39.24■■■■□ 3.87
CSNK1E-204ENST00000403904 TM6SF1Q9BZW5 370 aa39.24■■■■□ 3.87
CSNK1E-204ENST00000403904 HMGB1P09429 215 aaKnown RBP39.23■■■■□ 3.87
CSNK1E-204ENST00000403904 SAPCD2Q86UD0 394 aa39.23■■■■□ 3.87
CSNK1E-204ENST00000403904 UPF3BQ9BZI7 483 aaKnown RBP39.23■■■■□ 3.87
CSNK1E-204ENST00000403904 ZSWIM6Q9HCJ5 1215 aa39.23■■■■□ 3.87
CSNK1E-204ENST00000403904 GINM1Q9NU53 330 aa39.23■■■■□ 3.87
CSNK1E-204ENST00000403904 IGKV6D-41A0A0C4DH26 115 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 PRC1O43663 620 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 PTPRAP18433 802 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 DHX32Q7L7V1 743 aaKnown RBP39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 IQCA1Q86XH1 822 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 CEP95Q96GE4 821 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 TCEANC2Q96MN5 208 aa39.22■■■■□ 3.87
CSNK1E-204ENST00000403904 UNCXA6NJT0 531 aa39.21■■■■□ 3.87
CSNK1E-204ENST00000403904 UBAC1Q9BSL1 405 aa39.21■■■■□ 3.87
CSNK1E-204ENST00000403904 KANSL2Q9H9L4 492 aa39.21■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms