RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PKN1Q16512 942 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 LONRF3Q496Y0 759 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 ISM2Q6H9L7 571 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 ATP8A2Q9NTI2 1148 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 ORC4O43929 436 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 PNOCQ13519 176 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 PCDHB6Q9Y5E3 794 aa19.51■□□□□ 0.71
DNMT3A-205ENST00000402667 MYH6P13533 1939 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 PLEKHA8P1O95397 391 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 PTPREP23469 700 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 NCAPHQ15003 741 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 SPECC1Q5M775 1068 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 KRBA2Q6ZNG9 492 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 LRRC8AQ8IWT6 810 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 MYRIPQ8NFW9 859 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 RBM28Q9NW13 759 aaKnown RBP19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 FBXO2Q9UK22 296 aaPredicted RBP19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 ZBTB22O15209 634 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 CALM1P0DP23 149 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 CALM2P0DP24 149 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 CALM3P0DP25 149 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 GRIN1Q05586 938 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 ARID5BQ14865 1188 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 CABP5Q9NP86 173 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 V9GY48 417 aaPredicted RBP19.5■□□□□ 0.71
DNMT3A-205ENST00000402667 CYP2D6P10635 497 aa19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 XBP1P17861 261 aa19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 NFIXQ14938 502 aa19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 CNNM3Q8NE01 707 aa19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
DNMT3A-205ENST00000402667 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 DYNC1I1O14576 645 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 DDAH1O94760 285 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 SBK1Q52WX2 424 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 FAM196AQ6ZSG2 479 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 FILIP1Q7Z7B0 1213 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 SLC51AQ86UW1 340 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 ANKIB1Q9P2G1 1089 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 NMT2O60551 498 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 GRAPQ13588 217 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 FAM47AQ5JRC9 791 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 SPTY2D1Q68D10 685 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 FOXP4Q8IVH2 680 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 GRAPLQ8TC17 118 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 PHF20Q9BVI0 1012 aa19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 ARPP21Q9UBL0 812 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-205ENST00000402667 NEMFO60524 1076 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 ATP2B1P20020 1258 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 FAM13BQ9NYF5 915 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 LY75O60449 1722 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 IKBKBO14920 756 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 TPM4P67936 248 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 TMTC3Q6ZXV5 915 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 ELOA2Q8IYF1 753 aaPredicted RBP19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 CEP131Q9UPN4 1083 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 LEMD3Q9Y2U8 911 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 DLEC1Q9Y238 1755 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
DNMT3A-205ENST00000402667 MDM2Q00987 491 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 XPO4Q9C0E2 1151 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 PCDHA5Q9Y5H7 936 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 FAM205CA6NFA0 338 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 KRT2P35908 639 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 PDE4BQ07343 736 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 HSP90AA2PQ14568 343 aaPredicted RBP19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 CNBD1Q8NA66 436 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 IFNKQ9P0W0 207 aa19.46■□□□□ 0.71
DNMT3A-205ENST00000402667 FOXN1O15353 648 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 RRP9O43818 475 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 MCM9Q9NXL9 1143 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 MAST2Q6P0Q8 1798 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 SMC2O95347 1197 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 USP17L8P0C7I0 530 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 RBM10P98175 930 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 SRBD1Q8N5C6 995 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 HSD3B7Q9H2F3 369 aa19.45■□□□□ 0.7
DNMT3A-205ENST00000402667 POLR2DO15514 142 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 LMOD1P29536 600 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 OSBPL5Q9H0X9 879 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 LRRC4BQ9NT99 713 aa19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 LAMB1P07942 1786 aa19.44■□□□□ 0.7
DNMT3A-205ENST00000402667 CNTNAP5Q8WYK1 1306 aa19.43■□□□□ 0.7
DNMT3A-205ENST00000402667 TRIM75PA6NK02 468 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms