RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 HHIPL1Q96JK4 782 aa16.15■□□□□ 0.18
SNU13-204ENST00000402458 OTOFQ9HC10 1997 aa16.15■□□□□ 0.18
SNU13-204ENST00000402458 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
SNU13-204ENST00000402458 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 GDF11O95390 407 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 NT5C2P49902 561 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 ZNF157P51786 506 aaPredicted RBP16.14■□□□□ 0.17
SNU13-204ENST00000402458 TRDNQ13061 729 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 RGMBQ6NW40 437 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
SNU13-204ENST00000402458 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 ELP3Q9H9T3 547 aa16.14■□□□□ 0.17
SNU13-204ENST00000402458 ORC4O43929 436 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 PRDM1O75626 825 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 CYP21A2P08686 494 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
SNU13-204ENST00000402458 DEFB115Q30KQ5 88 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
SNU13-204ENST00000402458 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 CCDC102AQ96A19 550 aa16.13■□□□□ 0.17
SNU13-204ENST00000402458 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 RANBP6O60518 1105 aaKnown RBP16.12■□□□□ 0.17
SNU13-204ENST00000402458 GH2P01242 217 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 RASA1P20936 1047 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 ECE1P42892 770 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 NECTIN1Q15223 517 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 CLMNQ96JQ2 1002 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 KRT23Q9C075 422 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 AS3MTQ9HBK9 375 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNU13-204ENST00000402458 SNCAIPQ9Y6H5 919 aa16.12■□□□□ 0.17
SNU13-204ENST00000402458 RASSF10A6NK89 507 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 SLC27A2O14975 620 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 FGRP09769 529 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 PPATQ06203 517 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
SNU13-204ENST00000402458 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
SNU13-204ENST00000402458 ESR2Q92731 530 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 OPTNQ96CV9 577 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
SNU13-204ENST00000402458 SPDYE5A6NIY4 337 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 AKR1B1P15121 316 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 PTPRAP18433 802 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 TFAP4Q01664 338 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 KRT32Q14532 448 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
SNU13-204ENST00000402458 INCENPQ9NQS7 918 aa16.1■□□□□ 0.17
SNU13-204ENST00000402458 E7EWF7 191 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 ZBTB48P10074 688 aaPredicted RBP16.09■□□□□ 0.17
SNU13-204ENST00000402458 HSPA4P34932 840 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 GRM1Q13255 1194 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 PPIL2Q13356 520 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 SEPT2Q15019 361 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 NCOA7Q8NI08 942 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 WNK4Q96J92 1243 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
SNU13-204ENST00000402458 B4E1Z4 1266 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 SLC10A3P09131 477 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 HTRA3P83110 453 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 SPRYD7Q5W111 196 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 IQCA1Q86XH1 822 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 CAPNS2Q96L46 248 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 NEDD4P46934 1319 aa16.08■□□□□ 0.16
SNU13-204ENST00000402458 KDM4AO75164 1064 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 JAG1P78504 1218 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 ICA1Q05084 483 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
SNU13-204ENST00000402458 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
SNU13-204ENST00000402458 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 ZNF280CQ8ND82 737 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 FEZ1Q99689 392 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 WDR18Q9BV38 432 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
SNU13-204ENST00000402458 CXCL11O14625 94 aa16.06■□□□□ 0.16
SNU13-204ENST00000402458 SEC24BO95487 1268 aa16.06■□□□□ 0.16
SNU13-204ENST00000402458 GTF2A2P52657 109 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms