RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 PHIPQ8WWQ0 1821 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 SSC5DA1L4H1 1573 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 K7ELQ4 463 aaPredicted RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 KDM4AO75164 1064 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 Q6ZUG5 572 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 ZNF444Q8N0Y2 327 aaPredicted RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 TBC1D2Q9BYX2 928 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 DEFB129Q9H1M3 183 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 VEZTQ9HBM0 779 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 ANGEL1Q9UNK9 670 aaKnown RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 TCP10Q12799 353 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 SART3Q15020 963 aaKnown RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 RBM26Q5T8P6 1007 aaKnown RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 HSCBQ8IWL3 235 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 CSRNP1Q96S65 589 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 UPF3BQ9BZI7 483 aaKnown RBP8.06□□□□□ -1.12
USP16-203ENST00000399975 MKNK2Q9HBH9 465 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 INCENPQ9NQS7 918 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 GGA3Q9NZ52 723 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 OTOFQ9HC10 1997 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 MYH4Q9Y623 1939 aa8.06□□□□□ -1.12
USP16-203ENST00000399975 UNCXA6NJT0 531 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 CD2BP2O95400 341 aaKnown RBP8.05□□□□□ -1.12
USP16-203ENST00000399975 VEGFAP15692 232 aaPredicted RBP8.05□□□□□ -1.12
USP16-203ENST00000399975 DCAF15Q66K64 600 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 IQCA1Q86XH1 822 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 DCPSQ96C86 337 aaKnown RBP8.05□□□□□ -1.12
USP16-203ENST00000399975 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP16-203ENST00000399975 TMEM39BQ9GZU3 492 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 PHF20L1A8MW92 1017 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 CPA1P15085 419 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 TFAP4Q01664 338 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 PPP2R5BQ15173 497 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 SUPT20HL1Q3ZLR7 823 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 NOL9Q5SY16 702 aaKnown RBP8.05□□□□□ -1.12
USP16-203ENST00000399975 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 MKL1Q969V6 931 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 INTS4Q96HW7 963 aaKnown RBP8.05□□□□□ -1.12
USP16-203ENST00000399975 IL17RBQ9NRM6 502 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
USP16-203ENST00000399975 PFKFB2O60825 505 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 MAP3K11Q16584 847 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TMEM179Q6ZVK1 233 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 SLC44A5Q8NCS7 719 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 ZNF341Q9BYN7 854 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.04□□□□□ -1.12
USP16-203ENST00000399975 ERICH2A1L162 156 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TSPY2A6NKD2 308 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 IFIT3O14879 490 aaKnown RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 RANBP6O60518 1105 aaKnown RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 DDAH1O94760 285 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TSPY3P0CV98 308 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TSPY8P0CW00 308 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 WTAPQ15007 396 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 TMEM67Q5HYA8 995 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 LDHDQ86WU2 507 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 ZSCAN29Q8IWY8 852 aaPredicted RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 ENAHQ8N8S7 591 aaPredicted RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 UBAC1Q9BSL1 405 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TRIM34Q9BYJ4 488 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 NYAP2Q9P242 653 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TNKSO95271 1327 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 CTNND1O60716 968 aaKnown RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 CALM1P0DP23 149 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 CALM2P0DP24 149 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 CALM3P0DP25 149 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 AKR1B1P15121 316 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 TMX3Q96JJ7 454 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 LLPHQ9BRT6 129 aaKnown RBP8.04□□□□□ -1.12
USP16-203ENST00000399975 MTMR4Q9NYA4 1195 aa8.04□□□□□ -1.12
USP16-203ENST00000399975 PDIA3P30101 505 aaKnown RBP8.03□□□□□ -1.12
USP16-203ENST00000399975 CAP2P40123 477 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 RRP12Q5JTH9 1297 aaKnown RBP8.03□□□□□ -1.12
USP16-203ENST00000399975 CDC37L1Q7L3B6 337 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 SULF1Q8IWU6 871 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 KANSL2Q9H9L4 492 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 BRPF3Q9ULD4 1205 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 PRDM1O75626 825 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 TOP1P11387 765 aaKnown RBP8.03□□□□□ -1.12
USP16-203ENST00000399975 RRP1BQ14684 758 aaKnown RBP8.03□□□□□ -1.12
USP16-203ENST00000399975 ME3Q16798 604 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 ABCB5Q2M3G0 1257 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 FAM47AQ5JRC9 791 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 NBPF12Q5TAG4 269 aaPredicted RBP8.03□□□□□ -1.12
USP16-203ENST00000399975 BRF1Q92994 677 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
USP16-203ENST00000399975 SMARCA1P28370 1054 aa8.02□□□□□ -1.13
USP16-203ENST00000399975 IFIT1BQ5T764 474 aaKnown RBP8.02□□□□□ -1.13
USP16-203ENST00000399975 APOA5Q6Q788 366 aa8.02□□□□□ -1.13
USP16-203ENST00000399975 GTF3C6Q969F1 213 aa8.02□□□□□ -1.13
USP16-203ENST00000399975 RRAGCQ9HB90 399 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms