RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
LINC02449-202ENST00000399866 PSMD1Q99460 953 aa10.04□□□□□ -0.8
LINC02449-202ENST00000399866 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
LINC02449-202ENST00000399866 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
LINC02449-202ENST00000399866 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
LINC02449-202ENST00000399866 USP40Q9NVE5 1235 aa10.04□□□□□ -0.8
LINC02449-202ENST00000399866 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
LINC02449-202ENST00000399866 FSD2A1L4K1 749 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 HDLBPQ00341 1268 aaKnown RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 PICALMQ13492 652 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 PPP2R5BQ15173 497 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 ZSCAN23Q3MJ62 389 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 RCSD1Q6JBY9 416 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 CDC42EP5Q6NZY7 148 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 LEO1Q8WVC0 666 aaPredicted RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 WASF1Q92558 559 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 ZDHHC15Q96MV8 337 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 MTFR1LQ9H019 292 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
LINC02449-202ENST00000399866 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
LINC02449-202ENST00000399866 BRCA1P38398 1863 aaKnown RBP10.02□□□□□ -0.8
LINC02449-202ENST00000399866 GOLGA6L3A6NEY3 463 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 YDJCA8MPS7 323 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 CDK8P49336 464 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ZNF445P59923 1031 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TGFB2P61812 414 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TROAPQ12815 778 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TRIM29Q14134 588 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 SOGA3Q5TF21 947 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 KRT40Q6A162 431 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ATL3Q6DD88 541 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 APOBEC3HQ6NTF7 200 aaKnown RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TMTC3Q6ZXV5 915 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 BRAPQ7Z569 592 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 DGKHQ86XP1 1220 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 KIAA0825Q8IV33 1275 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ANKS1AQ92625 1134 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 SPATA32Q96LK8 384 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ZNF396Q96N95 335 aaPredicted RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 MRIQ9BWK5 157 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 KAT14Q9H8E8 782 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 IL17RBQ9NRM6 502 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 GJB4Q9NTQ9 266 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TCP11L1Q9NUJ3 509 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TMEM63CQ9P1W3 806 aa10.02□□□□□ -0.81
LINC02449-202ENST00000399866 TFIP11Q9UBB9 837 aaKnown RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
LINC02449-202ENST00000399866 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 KIF28PB7ZC32 967 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 DEXIO95424 95 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 FUT2Q10981 343 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 R3HDM1Q15032 1099 aaKnown RBP10.01□□□□□ -0.81
LINC02449-202ENST00000399866 L1TD1Q5T7N2 865 aaKnown RBP10.01□□□□□ -0.81
LINC02449-202ENST00000399866 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
LINC02449-202ENST00000399866 OSBPL5Q9H0X9 879 aaPredicted RBP10.01□□□□□ -0.81
LINC02449-202ENST00000399866 ZNF277Q9NRM2 450 aaPredicted RBP10.01□□□□□ -0.81
LINC02449-202ENST00000399866 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
LINC02449-202ENST00000399866 SIPA1L1O43166 1804 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 GUCY1A2P33402 732 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 GABPAQ06546 454 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 CMTR1Q8N1G2 835 aaKnown RBP10□□□□□ -0.81
LINC02449-202ENST00000399866 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 PNMA1Q8ND90 353 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 NEDD1Q8NHV4 660 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 CTCFLQ8NI51 663 aaPredicted RBP10□□□□□ -0.81
LINC02449-202ENST00000399866 USP28Q96RU2 1077 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 MAP3K14Q99558 947 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 FTOQ9C0B1 505 aaKnown RBP eCLIP10□□□□□ -0.81
LINC02449-202ENST00000399866 VPS33BQ9H267 617 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 PCDHAC2Q9Y5I4 1007 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 MYO3BQ8WXR4 1341 aa10□□□□□ -0.81
LINC02449-202ENST00000399866 TCHHQ07283 1943 aa9.99□□□□□ -0.81
LINC02449-202ENST00000399866 COL2A1P02458 1487 aaPredicted RBP9.99□□□□□ -0.81
LINC02449-202ENST00000399866 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
LINC02449-202ENST00000399866 MMP1P03956 469 aa9.99□□□□□ -0.81
LINC02449-202ENST00000399866 HLA-DOAP06340 250 aa9.99□□□□□ -0.81
LINC02449-202ENST00000399866 KIF5BP33176 963 aa9.99□□□□□ -0.81
LINC02449-202ENST00000399866 RBM5P52756 815 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC02449-202ENST00000399866 NFIAQ12857 509 aa9.99□□□□□ -0.81
LINC02449-202ENST00000399866 GRM4Q14833 912 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms