RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 RUNDC1Q96C34 613 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 EPAS1Q99814 870 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 COG4Q9H9E3 785 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DDX5P17844 614 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 C11orf88Q6PI97 169 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RASSF5Q8WWW0 418 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RPRD1BQ9NQG5 326 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 H0Y626 953 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM16O95361 564 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT15P19012 456 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 OLFM3Q96PB7 478 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 DNAI1Q9UI46 699 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 BFSP1Q12934 665 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 HS1BP3Q53T59 392 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 TUFT1Q9NNX1 390 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 MEIS1O00470 390 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 NACA2Q9H009 215 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 NVLO15381 856 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT2P35908 639 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 BFSP2Q13515 415 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 ATG16L1Q676U5 607 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 CKAP2LQ8IYA6 745 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 CCPG1Q9ULG6 757 aa9.46□□□□□ -0.89
CACNA1C-220ENST00000399655 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 STAT6P42226 847 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 RIPK4P57078 832 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 WDR44Q5JSH3 913 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 NXNQ6DKJ4 435 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 UBAP1Q9NZ09 502 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 EIF2S1P05198 315 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 MCM7P33993 719 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 POMGNT1Q8WZA1 660 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 LZTS3O60299 673 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 TMEM245Q9H330 911 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 NAF1Q96HR8 494 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 GARSP41250 739 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 MYLK2Q9H1R3 596 aa9.46□□□□□ -0.9
CACNA1C-220ENST00000399655 POLA1P09884 1462 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 TOMM70O94826 608 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 IDEP14735 1019 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 UBE2HP62256 183 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 EFHD2Q96C19 240 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 COQ7Q99807 217 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 KAT6AQ92794 2004 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 WDR47O94967 919 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 POLD1P28340 1107 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 STX2P32856 288 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 S100A5P33763 92 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 IGHMBP2P38935 993 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 ARHGEF3Q9NR81 526 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 PPIDQ08752 370 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 ARHGAP18Q8N392 663 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 PHKA1P46020 1223 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 PAK2Q13177 524 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 ZNF229Q9UJW7 825 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 ITGB1BP2Q9UKP3 347 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 TMTC3Q6ZXV5 915 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 ABHD8Q96I13 439 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 IARS2Q9NSE4 1012 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 RASSF9O75901 435 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 TMED10P49755 219 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 NAPBQ9H115 298 aa9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 UTP6Q9NYH9 597 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-220ENST00000399655 GJC1P36383 396 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 ING2Q9H160 280 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 MYO1EQ12965 1108 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 KRT71Q3SY84 523 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 TADA1Q96BN2 335 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CNBD2Q96M20 576 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SIKE1Q9BRV8 207 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 MPNDQ8N594 471 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 RNF34Q969K3 372 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 KRT12Q99456 494 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 TYW1Q9NV66 732 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 RRP7AQ9Y3A4 280 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 NOP56O00567 594 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SUN1O94901 812 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 IL1RL1Q01638 556 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 DTX3LQ8TDB6 740 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 SPOPO43791 374 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
CACNA1C-220ENST00000399655 CARD9Q9H257 536 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms