RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CEBPZQ03701 1054 aaKnown RBP17.63■□□□□ 0.41
COL25A1-201ENST00000399126 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
COL25A1-201ENST00000399126 KIF3AQ9Y496 699 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 DLEC1Q9Y238 1755 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 ECE2O60344 883 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 MBD3O95983 291 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 GUCY1A2P33402 732 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 RTN1Q16799 776 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 IFIT1BQ5T764 474 aaKnown RBP17.62■□□□□ 0.41
COL25A1-201ENST00000399126 SYNE3Q6ZMZ3 975 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 IQCA1Q86XH1 822 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
COL25A1-201ENST00000399126 ZNF646O15015 1829 aaPredicted RBP17.62■□□□□ 0.41
COL25A1-201ENST00000399126 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
COL25A1-201ENST00000399126 DPEP1P16444 411 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 PDE4BQ07343 736 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 GOLGA6L3A6NEY3 463 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 TSPY2A6NKD2 308 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 PCP11498 1178 aaKnown RBP17.61■□□□□ 0.41
COL25A1-201ENST00000399126 PICALMQ13492 652 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 FANCBQ8NB91 859 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 CHMP4CQ96CF2 233 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
COL25A1-201ENST00000399126 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 KCNA3P22001 575 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 UBE2HP62256 183 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 ZSCAN16Q9H4T2 348 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 NID2Q14112 1375 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 TFAP4Q01664 338 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 PODNQ7Z5L7 613 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 IL17RBQ9NRM6 502 aa17.6■□□□□ 0.41
COL25A1-201ENST00000399126 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-201ENST00000399126 ROBO3Q96MS0 1386 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 MYH6P13533 1939 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 SYCE3A1L190 88 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 CDKL5O76039 1030 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 SLF2Q8IX21 1173 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 TMTC2Q8N394 836 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 RCSD1Q6JBY9 416 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
COL25A1-201ENST00000399126 NBPF11Q86T75 865 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
COL25A1-201ENST00000399126 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.41
COL25A1-201ENST00000399126 IFNAR1P17181 557 aa17.58■□□□□ 0.41
COL25A1-201ENST00000399126 TROAPQ12815 778 aa17.58■□□□□ 0.41
COL25A1-201ENST00000399126 DACT2Q5SW24 774 aa17.58■□□□□ 0.41
COL25A1-201ENST00000399126 MKNK2Q9HBH9 465 aa17.58■□□□□ 0.41
COL25A1-201ENST00000399126 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.4
COL25A1-201ENST00000399126 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
COL25A1-201ENST00000399126 PLCG2P16885 1265 aa17.58■□□□□ 0.4
COL25A1-201ENST00000399126 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
COL25A1-201ENST00000399126 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 FMNL1O95466 1100 aaPredicted RBP17.57■□□□□ 0.4
COL25A1-201ENST00000399126 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 KRT40Q6A162 431 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
COL25A1-201ENST00000399126 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 PPIP5K2O43314 1243 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 XRCC6P12956 609 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL25A1-201ENST00000399126 RASA1P20936 1047 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
COL25A1-201ENST00000399126 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 PGBD1Q96JS3 809 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 USP40Q9NVE5 1235 aa17.57■□□□□ 0.4
COL25A1-201ENST00000399126 RAD21O60216 631 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CACNB3P54284 484 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
COL25A1-201ENST00000399126 NFIAQ12857 509 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CDC42EP5Q6NZY7 148 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
COL25A1-201ENST00000399126 PANK2Q9BZ23 570 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
COL25A1-201ENST00000399126 MTMR7Q9Y216 660 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 COL4A5P29400 1685 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CRKP46108 304 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CDK8P49336 464 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 ZNF445P59923 1031 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 STRIP1Q5VSL9 837 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 SLC16A10Q8TF71 515 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 ELP1O95163 1332 aa17.56■□□□□ 0.4
COL25A1-201ENST00000399126 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 CC2D2BQ6DHV5 1058 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 TEKT1Q969V4 418 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms