RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 L2HGDHQ9H9P8 463 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 NCOA5Q9HCD5 579 aaKnown RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 GUCA1BQ9UMX6 200 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 CCDC178Q5BJE1 867 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 KCTD16Q68DU8 428 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 MAGEB6Q8N7X4 407 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 IGSF22Q8N9C0 903 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 RIN2Q8WYP3 895 aaPredicted RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 MRPS27Q92552 414 aaKnown RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 FAM227BQ96M60 508 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 MCM9Q9NXL9 1143 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 TPX2Q9ULW0 747 aaKnown RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 SND1Q7KZF4 910 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH23-203ENST00000398788 CALML4Q96GE6 196 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 TSG101Q99816 390 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 PPANQ9NQ55 473 aaKnown RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 DDX21Q9NR30 783 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH23-203ENST00000398788 E7EVH7 732 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 AKR1B10O60218 316 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 YEATS4O95619 227 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 ZFYP08048 801 aaPredicted RBP10.44□□□□□ -0.74
CDH23-203ENST00000398788 HLTFQ14527 1009 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH23-203ENST00000398788 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 TRIM68Q6AZZ1 485 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 CUL5Q93034 780 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 KLC4Q9NSK0 619 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH23-203ENST00000398788 E9PCH4 1651 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 TET3O43151 1660 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 PTPDC1A2A3K4 754 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 GNPATO15228 680 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 TUBBP07437 444 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 THOC1Q96FV9 657 aaKnown RBP10.43□□□□□ -0.74
CDH23-203ENST00000398788 RTL1A6NKG5 1358 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 METP08581 1390 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 TRIM21P19474 475 aaKnown RBP10.43□□□□□ -0.74
CDH23-203ENST00000398788 SLC8A1P32418 973 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 PAFAH1B1P43034 410 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 RWDD2BP57060 319 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 TNIP1Q15025 636 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 PPP1R7Q15435 360 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 DBN1Q16643 649 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 RBM26Q5T8P6 1007 aaKnown RBP10.43□□□□□ -0.74
CDH23-203ENST00000398788 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
CDH23-203ENST00000398788 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 CABP5Q9NP86 173 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 CCNL1Q9UK58 526 aaPredicted RBP10.43□□□□□ -0.74
CDH23-203ENST00000398788 RGS12O14924 1447 aa10.43□□□□□ -0.74
CDH23-203ENST00000398788 GSTTP1A0A1W2PQM5 241 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 SPTLC2O15270 562 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 CLTAP09496 248 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 ARID5AQ03989 594 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 TRAPPC3LQ5T215 181 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 CPLX4Q7Z7G2 160 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 WDR24Q96S15 920 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 SEC62Q99442 399 aaKnown RBP10.42□□□□□ -0.74
CDH23-203ENST00000398788 FUCA2Q9BTY2 467 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 POLD4Q9HCU8 107 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 LARGE1O95461 756 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 NAPGQ99747 312 aaPredicted RBP10.42□□□□□ -0.74
CDH23-203ENST00000398788 SH3BP1Q9Y3L3 701 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 EFCAB6Q5THR3 1501 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 KCNQ3O43525 872 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 PDCLQ13371 301 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 PPP1R12CQ9BZL4 782 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 NYXQ9GZU5 481 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 TAF5LO75529 589 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 HLA-DOAP06340 250 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 ME3Q16798 604 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 CAPRIN2Q6IMN6 1127 aaKnown RBP10.42□□□□□ -0.74
CDH23-203ENST00000398788 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 SYCP3Q8IZU3 236 aa10.42□□□□□ -0.74
CDH23-203ENST00000398788 ZNF496Q96IT1 587 aaPredicted RBP10.42□□□□□ -0.74
CDH23-203ENST00000398788 B4E1Z4 1266 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 RNF113AO15541 343 aaKnown RBP10.41□□□□□ -0.74
CDH23-203ENST00000398788 USO1O60763 962 aaKnown RBP10.41□□□□□ -0.74
CDH23-203ENST00000398788 POLD1P28340 1107 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 PPFIA1Q13136 1202 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 DHX32Q7L7V1 743 aaKnown RBP10.41□□□□□ -0.74
CDH23-203ENST00000398788 UIMC1Q96RL1 719 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 ZC3H12CQ9C0D7 883 aaKnown RBP10.41□□□□□ -0.74
CDH23-203ENST00000398788 ETAA1Q9NY74 926 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 PCK1P35558 622 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 MYO1EQ12965 1108 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 CRYMQ14894 314 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
CDH23-203ENST00000398788 TCP11Q8WWU5 503 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 CDC23Q9UJX2 597 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 PARP3Q9Y6F1 533 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 LMTK2Q8IWU2 1503 aa10.41□□□□□ -0.74
CDH23-203ENST00000398788 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms