RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 GYS1P13807 737 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
MSL3-207ENST00000398527 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 PICK1Q9NRD5 415 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
MSL3-207ENST00000398527 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
MSL3-207ENST00000398527 KRT38O76015 456 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 RRM1P23921 792 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 PDIA6Q15084 440 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 TRIM42Q8IWZ5 723 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 RMDN2Q96LZ7 410 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 C9orf78Q9NZ63 289 aaPredicted RBP12.29□□□□□ -0.44
MSL3-207ENST00000398527 PRR12Q9ULL5 1215 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
MSL3-207ENST00000398527 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 F8VZ95 297 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 IL4RP24394 825 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 VEGFBP49765 207 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
MSL3-207ENST00000398527 IL25Q9H293 177 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
MSL3-207ENST00000398527 MYCLP1P12525 358 aaPredicted RBP12.28□□□□□ -0.44
MSL3-207ENST00000398527 ENPP1P22413 925 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 CLK1P49759 484 aaKnown RBP12.28□□□□□ -0.44
MSL3-207ENST00000398527 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 NFATC2IPQ8NCF5 419 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
MSL3-207ENST00000398527 DIAPH3Q9NSV4 1193 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 HOXA2O43364 376 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 MYO1BO43795 1136 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 IFIT2P09913 472 aaKnown RBP12.28□□□□□ -0.44
MSL3-207ENST00000398527 GTF2F1P35269 517 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSL3-207ENST00000398527 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
MSL3-207ENST00000398527 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.44
MSL3-207ENST00000398527 HOXD10P28358 340 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 CHRNA5P30532 468 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 GJA8P48165 433 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 SLC39A6Q13433 755 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.44
MSL3-207ENST00000398527 PKN1Q16512 942 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 VMP1Q96GC9 406 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.44
MSL3-207ENST00000398527 RBSNQ9H1K0 784 aa12.27□□□□□ -0.44
MSL3-207ENST00000398527 hCG_2014768A0A024R1R8 64 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 HNRNPH2P55795 449 aaKnown RBP12.27□□□□□ -0.45
MSL3-207ENST00000398527 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.45
MSL3-207ENST00000398527 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 ACBD5Q5T8D3 534 aaPredicted RBP12.27□□□□□ -0.45
MSL3-207ENST00000398527 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 DRC7Q8IY82 874 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 TRIM7Q9C029 511 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 CD248Q9HCU0 757 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 IP6K2Q9UHH9 426 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 G3BP2Q9UN86 482 aaKnown RBP12.27□□□□□ -0.45
MSL3-207ENST00000398527 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
MSL3-207ENST00000398527 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 A6NJR5 290 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 FMNL1O95466 1100 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 LDHCP07864 332 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 IGBP1P78318 339 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 SFMBT2Q5VUG0 894 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 DYTNA2CJ06 578 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 CARNS1A5YM72 827 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 AK2P54819 239 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
MSL3-207ENST00000398527 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 CHCHD4Q8N4Q1 142 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 HMG20BQ9P0W2 317 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 U3KPZ7 1027 aaPredicted RBP12.26□□□□□ -0.45
MSL3-207ENST00000398527 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
MSL3-207ENST00000398527 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 PASKQ96RG2 1323 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms