RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 LIFRP42702 1097 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 RCAN1P53805 252 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
APEX1-202ENST00000398030 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 KRT26Q7Z3Y9 468 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 BRF1Q92994 677 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 TTC14Q96N46 770 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 ZNF341Q9BYN7 854 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
APEX1-202ENST00000398030 SH2D4AQ9H788 454 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
APEX1-202ENST00000398030 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.63□□□□□ -0.23
APEX1-202ENST00000398030 ZNF646O15015 1829 aaPredicted RBP13.63□□□□□ -0.23
APEX1-202ENST00000398030 SH2B2O14492 632 aaPredicted RBP13.62□□□□□ -0.23
APEX1-202ENST00000398030 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
APEX1-202ENST00000398030 CDKL5O76039 1030 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
APEX1-202ENST00000398030 GABPAQ06546 454 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 PPP2R5BQ15173 497 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 SBF1O95248 1867 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 CNTNAP1P78357 1384 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
APEX1-202ENST00000398030 LAMB1P07942 1786 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 CPLX1O14810 134 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 EGFRP00533 1210 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 CPA1P15085 419 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 RASA1P20936 1047 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
APEX1-202ENST00000398030 ZNF274Q96GC6 653 aaPredicted RBP13.61□□□□□ -0.23
APEX1-202ENST00000398030 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 ARHGEF10LQ9HCE6 1279 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 PLIN4Q96Q06 1357 aa13.61□□□□□ -0.23
APEX1-202ENST00000398030 ZBTB43O43298 467 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 DDAH1O94760 285 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 ASNSP08243 561 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 KIF5BP33176 963 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
APEX1-202ENST00000398030 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 SLC44A5Q8NCS7 719 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
APEX1-202ENST00000398030 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 TBC1D2Q9BYX2 928 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 PICK1Q9NRD5 415 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
APEX1-202ENST00000398030 TTLL1O95922 423 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
APEX1-202ENST00000398030 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
APEX1-202ENST00000398030 SHMT1P34896 483 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 METAP2P50579 478 aaKnown RBP eCLIP13.59□□□□□ -0.23
APEX1-202ENST00000398030 ICA1Q05084 483 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 SGMS1Q86VZ5 419 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 TMX3Q96JJ7 454 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 LRRC2Q9BYS8 371 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
APEX1-202ENST00000398030 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 ADAMTSL1Q8N6G6 1762 aa13.59□□□□□ -0.23
APEX1-202ENST00000398030 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 CTNND1O60716 968 aaKnown RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 GNAQP50148 359 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 ANTXR2P58335 489 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 ATP2B2Q01814 1243 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 APOBRQ0VD83 1088 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 RAB3GAP1Q15042 981 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 ARMC9Q7Z3E5 817 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 LY9Q9HBG7 655 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 CSADQ9Y600 493 aa13.58□□□□□ -0.23
APEX1-202ENST00000398030 DDX60LQ5H9U9 1706 aaKnown RBP13.58□□□□□ -0.23
APEX1-202ENST00000398030 UTRNP46939 3433 aa13.58□□□□□ -0.24
APEX1-202ENST00000398030 SCN4AP35499 1836 aa13.58□□□□□ -0.24
APEX1-202ENST00000398030 AKR1B1P15121 316 aa13.58□□□□□ -0.24
APEX1-202ENST00000398030 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
APEX1-202ENST00000398030 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.24
APEX1-202ENST00000398030 MIGA2Q7L4E1 593 aa13.58□□□□□ -0.24
APEX1-202ENST00000398030 MICU3Q86XE3 530 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms