RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SRP68Q9UHB9 627 aaKnown RBP21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ANAPC4Q9UJX5 808 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 NEMFO60524 1076 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 KRBA2Q6ZNG9 492 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TMC6Q7Z403 805 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SHISA4Q96DD7 197 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 HSD3B7Q9H2F3 369 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FOXP1Q9H334 677 aaPredicted RBP21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TFCP2L1Q9NZI6 479 aa21.08■□□□□ 0.97
CHRFAM7A-202ENST00000397827 PDCL2Q8N4E4 241 aa21.08■□□□□ 0.96
CHRFAM7A-202ENST00000397827 ZSCAN10Q96SZ4 725 aaPredicted RBP21.08■□□□□ 0.96
CHRFAM7A-202ENST00000397827 MTA3Q9BTC8 594 aa21.08■□□□□ 0.96
CHRFAM7A-202ENST00000397827 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SMTNL1A8MU46 457 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 TPM4P67936 248 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CABP5Q9NP86 173 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PCDHA5Q9Y5H7 936 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 RILPL1Q5EBL4 403 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 ZNF592Q92610 1267 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 VPS54Q9P1Q0 977 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FBXO2Q9UK22 296 aaPredicted RBP21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 JAG2Q9Y219 1238 aa21.07■□□□□ 0.96
CHRFAM7A-202ENST00000397827 A0A1B0GUL6 1792 aa21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 USP17L12C9JPN9 530 aa21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 USP17L21D6R901 530 aa21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FAM205CA6NFA0 338 aa21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 IFIT1BQ5T764 474 aaKnown RBP21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CTR9Q6PD62 1173 aa21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 OSBPL5Q9H0X9 879 aaPredicted RBP21.06■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PLEKHA8P1O95397 391 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 RPS8P62241 208 aaKnown RBP21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FANCCQ00597 558 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 AATFQ9NY61 560 aaKnown RBP eCLIP21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 IKBKBO14920 756 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PTPREP23469 700 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 GSDMDP57764 484 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 MECOMQ03112 1051 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 NSUN4Q96CB9 384 aaKnown RBP21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 BRIP1Q9BX63 1249 aa21.05■□□□□ 0.96
CHRFAM7A-202ENST00000397827 POLR2DO15514 142 aaKnown RBP21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 BMP6P22004 513 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 RCAN1P53805 252 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 ARMCX5Q6P1M9 558 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FBXO33Q7Z6M2 555 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PDILTQ8N807 584 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PRDX5P30044 214 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PKN1Q16512 942 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 USP49Q70CQ1 688 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SETDB2Q96T68 719 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 RNF26Q9BY78 433 aaPredicted RBP21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 IMPACTQ9P2X3 320 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 V9GY48 417 aaPredicted RBP21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 MYH6P13533 1939 aa21.04■□□□□ 0.96
CHRFAM7A-202ENST00000397827 NMT2O60551 498 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 MYL5Q02045 173 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PTPN21Q16825 1174 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 EARS2Q5JPH6 523 aaKnown RBP21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SLC10A5Q5PT55 438 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 DPF2Q92785 391 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 BAZ2BQ9UIF8 2168 aaKnown RBP21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 MDM2Q00987 491 aaPredicted RBP21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PDE4BQ07343 736 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CATIPQ7Z7H3 387 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 GRAMD1CQ8IYS0 662 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SERTAD1Q9UHV2 236 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 DUOX1Q9NRD9 1551 aa21.03■□□□□ 0.96
CHRFAM7A-202ENST00000397827 PRR29P0C7W0 189 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 HSP90AA4PQ58FG1 418 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 TXNRD3Q86VQ6 643 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 C8orf37Q96NL8 207 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 GNPATO15228 680 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 HIBADHP31937 336 aaKnown RBP21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 IRX5P78411 483 aaPredicted RBP21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 FUT2Q10981 343 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 CNTNAP4Q9C0A0 1308 aa21.02■□□□□ 0.96
CHRFAM7A-202ENST00000397827 SCN7AQ01118 1682 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TROAPQ12815 778 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 FAM47AQ5JRC9 791 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SLC51AQ86UW1 340 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CCAR2Q8N163 923 aaKnown RBP21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 FANCLQ9NW38 375 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NARFQ9UHQ1 456 aa21.02■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SERPINC1P01008 464 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 POSTNQ15063 836 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 PTPN14Q15678 1187 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CSRNP2Q9H175 543 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CTIFO43310 598 aaKnown RBP21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CYP2D6P10635 497 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 UBASH3AP57075 661 aa21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ZNF827Q17R98 1081 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms