RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 DDTLA6NHG4 134 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 TCP10Q12799 353 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 FAM83AQ86UY5 434 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 ANKS1AQ92625 1134 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 CHMP4CQ96CF2 233 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 ZKSCAN3Q9BRR0 538 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 LLPHQ9BRT6 129 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 RNF181Q9P0P0 153 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 PI4KBQ9UBF8 816 aa22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 POLR2AP24928 1970 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-205ENST00000397761 MYO1BO43795 1136 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 TFAP4Q01664 338 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 STK3Q13188 491 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 NBPF9Q3BBW0 867 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 FAM47AQ5JRC9 791 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 GPRC5DQ9NZD1 345 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 TSPY2A6NKD2 308 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 GOLGA8BA8MQT2 603 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 CCDC178Q5BJE1 867 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 FOXP4Q8IVH2 680 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 ZNF444Q8N0Y2 327 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 NEDD1Q8NHV4 660 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 IL17RBQ9NRM6 502 aa22.85■■□□□ 1.25
PDLIM2-205ENST00000397761 CLRN2A0PK11 232 aa22.84■■□□□ 1.25
PDLIM2-205ENST00000397761 EGFRP00533 1210 aa22.84■■□□□ 1.25
PDLIM2-205ENST00000397761 SHMT1P34896 483 aa22.84■■□□□ 1.25
PDLIM2-205ENST00000397761 RCSD1Q6JBY9 416 aa22.84■■□□□ 1.25
PDLIM2-205ENST00000397761 ZC3H4Q9UPT8 1303 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 CCDC69A6NI79 296 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 NOVP48745 357 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 C9orf131Q5VYM1 1079 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 DGKHQ86XP1 1220 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 SMARCC2Q8TAQ2 1214 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 DNAJC18Q9H819 358 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 PGAP2Q9UHJ9 254 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 SMC3Q9UQE7 1217 aa22.83■■□□□ 1.25
PDLIM2-205ENST00000397761 ZBTB43O43298 467 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 CTDNEP1O95476 244 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 TSPY3P0CV98 308 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 TSPY8P0CW00 308 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 NFXL1Q6ZNB6 911 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 SLC12A7Q9Y666 1083 aa22.82■■□□□ 1.24
PDLIM2-205ENST00000397761 TCP10L2B9ZVM9 353 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 H7C1D1 291 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 NMT2O60551 498 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 KIF4BQ2VIQ3 1234 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 IFIT1BQ5T764 474 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 TATDN1Q6P1N9 297 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 SAMD7Q7Z3H4 446 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 ZNF654Q8IZM8 581 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 NSUN7Q8NE18 718 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 NCOA5Q9HCD5 579 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 SCN4AP35499 1836 aa22.81■■□□□ 1.24
PDLIM2-205ENST00000397761 DHX16O60231 1041 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 GJB2P29033 226 aa22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 CCT2P78371 535 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 NUCB2P80303 420 aa22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 ZSCAN29Q8IWY8 852 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 ATAD5Q96QE3 1844 aa22.8■■□□□ 1.24
PDLIM2-205ENST00000397761 IGKV6D-41A0A0C4DH26 115 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 METAP2P50579 478 aaKnown RBP eCLIP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 RAB3GAP1Q15042 981 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 PPP2R5BQ15173 497 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 ZNF784Q8NCA9 323 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 CCDC17Q96LX7 622 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 VEZTQ9HBM0 779 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 FAM217BQ9NTX9 383 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 HERC5Q9UII4 1024 aaKnown RBP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 NAP1L2Q9ULW6 460 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 TROAPQ12815 778 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 TNFAIP1Q13829 316 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 TBC1D10BQ4KMP7 808 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 SYNE3Q6ZMZ3 975 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 CSRNP1Q96S65 589 aa22.79■■□□□ 1.24
PDLIM2-205ENST00000397761 DDAH1O94760 285 aa22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 DDNO94850 711 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 AKR1B1P15121 316 aa22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 TNNI2P48788 182 aa22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 HMGN5P82970 282 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 MAP3K10Q02779 954 aa22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 MICU3Q86XE3 530 aa22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 CRACR2BQ8N4Y2 399 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-205ENST00000397761 GOLGA8AA7E2F4 631 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 TBC1D12O60347 775 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 JAK2O60674 1132 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 CALM1P0DP23 149 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 CALM2P0DP24 149 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 CALM3P0DP25 149 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 PDIA4P13667 645 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 PKP1Q13835 747 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 NTRK3Q16288 839 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 CATIPQ7Z7H3 387 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 MYL10Q9BUA6 226 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 ZDHHC9Q9Y397 364 aa22.77■■□□□ 1.24
PDLIM2-205ENST00000397761 CDC27P30260 824 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 EPS15P42566 896 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 RAB11FIP4Q86YS3 637 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms