RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ANAPC15P60006 121 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 RRP1BQ14684 758 aaKnown RBP27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 ADCK5Q3MIX3 580 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 ARMC9Q7Z3E5 817 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 KLRG1Q96E93 195 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 WRNIP1Q96S55 665 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 ZNF112Q9UJU3 913 aa27.91■■■□□ 2.06
TSPAN4-203ENST00000397397 GDF11O95390 407 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 IREB2P48200 963 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 RBM25P49756 843 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 FAM47AQ5JRC9 791 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 MOB2Q70IA6 237 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 ESR2Q92731 530 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 CCDC17Q96LX7 622 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 JAKMIP1Q96N16 626 aaKnown RBP27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 CREBZFQ9NS37 354 aa27.9■■■□□ 2.06
TSPAN4-203ENST00000397397 AKR1B1P15121 316 aa27.89■■■□□ 2.06
TSPAN4-203ENST00000397397 TBC1D32Q96NH3 1257 aa27.89■■■□□ 2.06
TSPAN4-203ENST00000397397 NEK1Q96PY6 1258 aa27.89■■■□□ 2.06
TSPAN4-203ENST00000397397 GBA2Q9HCG7 927 aaPredicted RBP27.89■■■□□ 2.06
TSPAN4-203ENST00000397397 PAPPA2Q9BXP8 1791 aa27.89■■■□□ 2.05
TSPAN4-203ENST00000397397 TSPY2A6NKD2 308 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 MPHOSPH10O00566 681 aaKnown RBP27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 KDM4AO75164 1064 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 INPP5BP32019 993 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 CAP2P40123 477 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 TFAP4Q01664 338 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 ABCB5Q2M3G0 1257 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 CST9Q5W186 159 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 C2orf69Q8N8R5 385 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.88■■■□□ 2.051e-7■■■□□ 19.2
TSPAN4-203ENST00000397397 NKX2-3Q8TAU0 364 aa27.88■■■□□ 2.05
TSPAN4-203ENST00000397397 ATAD5Q96QE3 1844 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 CTNND1O60716 968 aaKnown RBP27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 TSPY3P0CV98 308 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 TSPY8P0CW00 308 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 MAP3K9P80192 1104 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 MAP3K11Q16584 847 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 CABP5Q9NP86 173 aa27.87■■■□□ 2.05
TSPAN4-203ENST00000397397 TMEM88BA6NKF7 163 aa27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 PSMA5P28066 241 aa27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 NT5C2P49902 561 aa27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 FKBP1BP68106 108 aa27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 SHROOM1Q2M3G4 852 aaPredicted RBP27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 ZKSCAN4Q969J2 545 aaPredicted RBP27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 OTOFQ9HC10 1997 aa27.86■■■□□ 2.05
TSPAN4-203ENST00000397397 DOCK1Q14185 1865 aa27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 UBE2Q2LH0YL09 131 aa27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 GH2P01242 217 aa27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 JAG1P78504 1218 aa27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 MB21D2Q8IYB1 491 aaPredicted RBP27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 ZSWIM5Q9P217 1185 aa27.85■■■□□ 2.05
TSPAN4-203ENST00000397397 CASTP20810 708 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 CYB5R4Q7L1T6 521 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 NEDD1Q8NHV4 660 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 IL17RAQ96F46 866 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 ZBTB21Q9ULJ3 1066 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 HMGB1P09429 215 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 BLOC1S2Q6QNY1 142 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 TMEM179Q6ZVK1 233 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 ANKRD13AQ8IZ07 590 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 SCYL3Q8IZE3 742 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 TM6SF1Q9BZW5 370 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 CSADQ9Y600 493 aa27.84■■■□□ 2.05
TSPAN4-203ENST00000397397 CPA1P15085 419 aa27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 MCM5P33992 734 aa27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 COL9A3Q14050 684 aaPredicted RBP27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 NOL9Q5SY16 702 aaKnown RBP27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 CHST3Q7LGC8 479 aa27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 GINM1Q9NU53 330 aa27.83■■■□□ 2.05
TSPAN4-203ENST00000397397 PLIN4Q96Q06 1357 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 GREB1LQ9C091 1923 aaPredicted RBP27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 ASNSP08243 561 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 VGLL4Q14135 290 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 SEPT2Q15019 361 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 RAB3GAP1Q15042 981 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 ZKSCAN3Q9BRR0 538 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 PICK1Q9NRD5 415 aa27.82■■■□□ 2.04
TSPAN4-203ENST00000397397 PRC1O43663 620 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 GUCY1A2P33402 732 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 ANTXR2P58335 489 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 LDLRAD1Q5T700 205 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 DHX32Q7L7V1 743 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 IQCA1Q86XH1 822 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 KIF2CQ99661 725 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 ZSWIM6Q9HCJ5 1215 aa27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-203ENST00000397397 RPS6KB1P23443 525 aa27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 CLMNQ96JQ2 1002 aa27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 UBAC1Q9BSL1 405 aa27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 UPF3BQ9BZI7 483 aaKnown RBP27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 CYP46A1Q9Y6A2 500 aa27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 SNCAIPQ9Y6H5 919 aa27.8■■■□□ 2.04
TSPAN4-203ENST00000397397 IGKV6D-41A0A0C4DH26 115 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 UNCXA6NJT0 531 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 NMT2O60551 498 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 RUFY3Q7L099 469 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms