RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ANTXR2P58335 489 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 SUPT20HL1Q3ZLR7 823 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 TATDN1Q6P1N9 297 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 Q6ZUG5 572 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 CYB5R4Q7L1T6 521 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 TMTC2Q8N394 836 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 TCP11L1Q9NUJ3 509 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 ANGEL1Q9UNK9 670 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 MYH8P13535 1937 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 IFIT3O14879 490 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-202ENST00000397396 TFAP4Q01664 338 aa27.71■■■□□ 2.03
TSPAN4-202ENST00000397396 MAP3K10Q02779 954 aa27.71■■■□□ 2.03
TSPAN4-202ENST00000397396 ZSCAN10Q96SZ4 725 aaPredicted RBP27.71■■■□□ 2.03
TSPAN4-202ENST00000397396 DNAJC18Q9H819 358 aa27.71■■■□□ 2.03
TSPAN4-202ENST00000397396 K7ELQ4 463 aaPredicted RBP27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 LIFRP42702 1097 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 TMEM67Q5HYA8 995 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 KRT26Q7Z3Y9 468 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 NEDD1Q8NHV4 660 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 ZSCAN31Q96LW9 406 aaPredicted RBP27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 TCEANC2Q96MN5 208 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 LIMCH1Q9UPQ0 1083 aa27.7■■■□□ 2.03
TSPAN4-202ENST00000397396 SH2B2O14492 632 aaPredicted RBP27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 CERKLQ49MI3 558 aaPredicted RBP27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 CHST3Q7LGC8 479 aa27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 RRAGCQ9HB90 399 aa27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 DAXXQ9UER7 740 aaPredicted RBP27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 TNKSO95271 1327 aa27.69■■■□□ 2.02
TSPAN4-202ENST00000397396 TOB2Q14106 344 aaPredicted RBP27.68■■■□□ 2.02
TSPAN4-202ENST00000397396 WTAPQ15007 396 aa27.68■■■□□ 2.02
TSPAN4-202ENST00000397396 FAM47AQ5JRC9 791 aa27.68■■■□□ 2.02
TSPAN4-202ENST00000397396 BRF1Q92994 677 aa27.68■■■□□ 2.02
TSPAN4-202ENST00000397396 SH2B1Q9NRF2 756 aaPredicted RBP27.68■■■□□ 2.02
TSPAN4-202ENST00000397396 COL9A3Q14050 684 aaPredicted RBP27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 CDC37L1Q7L3B6 337 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 IGDCC4Q8TDY8 1250 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 CHMP4CQ96CF2 233 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 LRRC2Q9BYS8 371 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 TBC1D2Q9BYX2 928 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 CABP5Q9NP86 173 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 GINM1Q9NU53 330 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 TMEM179Q6ZVK1 233 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 SGMS1Q86VZ5 419 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 LDHDQ86WU2 507 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 DGKHQ86XP1 1220 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 ZNF341Q9BYN7 854 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 CLEC11AQ9Y240 323 aa27.67■■■□□ 2.02
TSPAN4-202ENST00000397396 CD2BP2O95400 341 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 NF2P35240 595 aa27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 ABCB5Q2M3G0 1257 aa27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 IFIT1BQ5T764 474 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 NBPF12Q5TAG4 269 aaPredicted RBP27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 LY9Q9HBG7 655 aa27.66■■■□□ 2.02
TSPAN4-202ENST00000397396 CCDC69A6NI79 296 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 FAM196BA6NMK8 535 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 MPHOSPH10O00566 681 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 EVCP57679 992 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 SYNE3Q6ZMZ3 975 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 NFXL1Q6ZNB6 911 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 CDAN1Q8IWY9 1227 aa27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 ZNF274Q96GC6 653 aaPredicted RBP27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 SCAF8Q9UPN6 1271 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-202ENST00000397396 AKR1B1P15121 316 aa27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 RCAN1P53805 252 aa27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 SEC23AQ15436 765 aa27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 ENAHQ8N8S7 591 aaPredicted RBP27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 ANKS1AQ92625 1134 aa27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 ZKSCAN3Q9BRR0 538 aa27.64■■■□□ 2.01
TSPAN4-202ENST00000397396 ADM5C9JUS6 153 aa27.63■■■□□ 2.01
TSPAN4-202ENST00000397396 NOL8Q76FK4 1167 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-202ENST00000397396 MIGA2Q7L4E1 593 aa27.63■■■□□ 2.01
TSPAN4-202ENST00000397396 NKX2-3Q8TAU0 364 aa27.63■■■□□ 2.01
TSPAN4-202ENST00000397396 IPO9Q96P70 1041 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-202ENST00000397396 TMX3Q96JJ7 454 aa27.62■■■□□ 2.01
TSPAN4-202ENST00000397396 KANSL2Q9H9L4 492 aa27.62■■■□□ 2.01
TSPAN4-202ENST00000397396 NMRK2Q9NPI5 230 aa27.62■■■□□ 2.01
TSPAN4-202ENST00000397396 SLC12A7Q9Y666 1083 aa27.62■■■□□ 2.01
TSPAN4-202ENST00000397396 GREB1LQ9C091 1923 aaPredicted RBP27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 IGKV6D-41A0A0C4DH26 115 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 KLF18A0A0U1RQI7 1052 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 PPP1R12BO60237 982 aaPredicted RBP27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 CAP2P40123 477 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 APOBRQ0VD83 1088 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 USP48Q86UV5 1035 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 KAT14Q9H8E8 782 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 IL17RBQ9NRM6 502 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 TPCN1Q9ULQ1 816 aa27.61■■■□□ 2.01
TSPAN4-202ENST00000397396 CTNND1O60716 968 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 TTLL1O95922 423 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 ASNSP08243 561 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CALM1P0DP23 149 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CALM2P0DP24 149 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CALM3P0DP25 149 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 NOVP48745 357 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CATIPQ7Z7H3 387 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 ZNF526Q8TF50 670 aaPredicted RBP27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CDCA5Q96FF9 252 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 CEP95Q96GE4 821 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 MTMR4Q9NYA4 1195 aa27.6■■■□□ 2.01
TSPAN4-202ENST00000397396 STX8Q9UNK0 236 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms